RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PRM2P04554 102 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 KIR3DS1Q14943 382 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 SPINK13Q1W4C9 94 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 Q6ZNX1 250 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 C1orf158Q8N1D5 194 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 EXOC3-AS1Q8N2X6 119 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 INO80EQ8NBZ0 244 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-214ENST00000554928 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 PHYHIPLQ96FC7 376 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 MRPL32Q9BYC8 188 aaKnown RBP8.93□□□□□ -0.98
SYNE2-214ENST00000554928 OR51M1Q9H341 326 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 CYTL1Q9NRR1 136 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 RNF24Q9Y225 148 aa8.93□□□□□ -0.98
SYNE2-214ENST00000554928 TRAV12-2A0A075B6T6 113 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 HMGB3O15347 200 aaKnown RBP8.92□□□□□ -0.98
SYNE2-214ENST00000554928 PMS2P11Q13670 270 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 FAM122CQ6P4D5 195 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 BAP18Q8IXM2 172 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 RNF141Q8WVD5 230 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 PAXXQ9BUH6 204 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 TIMM9Q9Y5J7 89 aa8.92□□□□□ -0.98
SYNE2-214ENST00000554928 OR7C2O60412 319 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 ZNF253O75346 499 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 DUSP14O95147 198 aaKnown RBP8.91□□□□□ -0.98
SYNE2-214ENST00000554928 NBEAP1P0C6P0 100 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 M6PRP20645 277 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 NANOS2P60321 138 aaKnown RBP8.91□□□□□ -0.98
SYNE2-214ENST00000554928 NUTF2P61970 127 aaKnown RBP8.91□□□□□ -0.98
SYNE2-214ENST00000554928 ZNF266Q14584 549 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 GUK1Q16774 197 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 TMEM41BQ5BJD5 291 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 ZNF705AQ6ZN79 300 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-214ENST00000554928 SSX7Q7RTT5 188 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 ALMS1Q8TCU4 4167 aa8.91□□□□□ -0.98
SYNE2-214ENST00000554928 BOLA2-SMG1P6H3BVE0 249 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 RHOBP62745 196 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 ERCC8Q13216 396 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 ICAM4Q14773 271 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 ACOT6Q3I5F7 207 aaPredicted RBP8.9□□□□□ -0.98
SYNE2-214ENST00000554928 RPP25LQ8N5L8 163 aaKnown RBP8.9□□□□□ -0.98
SYNE2-214ENST00000554928 OR10G4Q8NGN3 311 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 OR10G9Q8NGN4 311 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 OR10G7Q8NGN6 311 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 OR2G3Q8NGZ4 309 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 ST6GAL2Q96JF0 529 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 C1QTNF4Q9BXJ3 329 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 C11orf68Q9H3H3 251 aaKnown RBP8.9□□□□□ -0.98
SYNE2-214ENST00000554928 CELA1Q9UNI1 258 aa8.9□□□□□ -0.98
SYNE2-214ENST00000554928 HYDINQ4G0P3 5121 aa8.89□□□□□ -0.99
SYNE2-214ENST00000554928 hCG_2014768A0A024R1R8 64 aa8.89□□□□□ -0.99
SYNE2-214ENST00000554928 IGKV2-40A0A087WW87 121 aaPredicted RBP8.89□□□□□ -0.99
SYNE2-214ENST00000554928 IGKV2D-40P01614 121 aaPredicted RBP8.89□□□□□ -0.99
SYNE2-214ENST00000554928 CT45A10P0DMU9 189 aa8.89□□□□□ -0.99
SYNE2-214ENST00000554928 MIFP14174 115 aa8.89□□□□□ -0.99
SYNE2-214ENST00000554928 UBE2L3P68036 154 aaKnown RBP8.89□□□□□ -0.99
SYNE2-214ENST00000554928 PDE6HQ13956 83 aa8.89□□□□□ -0.99
SYNE2-214ENST00000554928 IGF2BP2-AS1Q96M15 143 aa8.89□□□□□ -0.99
SYNE2-214ENST00000554928 PSMG3Q9BT73 122 aaPredicted RBP8.89□□□□□ -0.99
SYNE2-214ENST00000554928 NPIPB6E9PJ23 425 aa8.88□□□□□ -0.99
SYNE2-214ENST00000554928 J3KRW8 73 aa8.88□□□□□ -0.99
SYNE2-214ENST00000554928 RANP62826 216 aaKnown RBP8.88□□□□□ -0.99
SYNE2-214ENST00000554928 ZNF726P1Q15940 193 aa8.88□□□□□ -0.99
SYNE2-214ENST00000554928 KHDC3LQ587J8 217 aa8.88□□□□□ -0.99
SYNE2-214ENST00000554928 ZNF767PQ75MW2 155 aa8.88□□□□□ -0.99
SYNE2-214ENST00000554928 KCNRGQ8N5I3 272 aa8.88□□□□□ -0.99
SYNE2-214ENST00000554928 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 A0A1W2PPV4 95 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 CXorf65A6NEN9 183 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 ZNF705GA8MUZ8 300 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-214ENST00000554928 ARL14EPLP0DKL9 152 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 CDC34P49427 236 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-214ENST00000554928 CD300CQ08708 224 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 OR10J6PQ8NGY7 276 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 RAB24Q969Q5 203 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 MRPL53Q96EL3 112 aaKnown RBP8.87□□□□□ -0.99
SYNE2-214ENST00000554928 VGLL1Q99990 258 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 AGPAT4-IT1Q9H0P7 198 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 Q9H3A6 140 aa8.87□□□□□ -0.99
SYNE2-214ENST00000554928 TENM2Q9NT68 2774 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 A0A1B0GVG6 124 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 INSP01308 110 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 STAG3L2P0CL84 134 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 STAG3L3P0CL85 134 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 AZU1P20160 251 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 EMP1P54849 157 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 TAS2R45P59539 299 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 GFI1BQ5VTD9 330 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 C11orf45Q8TAV5 145 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 NEU1Q99519 415 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 PPP1R14DQ9NXH3 145 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 GOLT1BQ9Y3E0 138 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
SYNE2-214ENST00000554928 HMSDA8MTL9 139 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 SERF2P84101 59 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 ZNF345Q14585 488 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 PRR9Q5T870 116 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 Q6ZQT7 251 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 Q8TAT8 98 aa8.85□□□□□ -0.99
SYNE2-214ENST00000554928 GNPNAT1Q96EK6 184 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms