RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 CT83Q5H943 113 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 IBA57Q5T440 356 aaKnown RBP8.79□□□□□ -1
VPS33B-204ENST00000554660 FAM162BQ5T6X4 162 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 ASPHD1Q5U4P2 390 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 TMEM136Q6ZRR5 245 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 MOB3BQ86TA1 216 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 TGIF2LXQ8IUE1 241 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 TMEM256Q8N2U0 113 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 RNF152Q8N8N0 203 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 Q8N9W7 124 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 TMEM116Q8NCL8 245 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 OR11H1Q8NG94 326 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 HSPB9Q9BQS6 159 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 PAXXQ9BUH6 204 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 TP53TG3Q9ULZ0 132 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 KLF12Q9Y4X4 402 aa8.79□□□□□ -1
VPS33B-204ENST00000554660 CGB1A6NKQ9 187 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 SLC17A3O00476 420 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 ACTL6BO94805 426 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 SCGB1D1O95968 90 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 ELANEP08246 267 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 MYOD1P15172 320 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 LINC00310P59036 64 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 SUMO1P63165 101 aaKnown RBP8.78□□□□□ -1
VPS33B-204ENST00000554660 WT1-ASQ06250 92 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 TMEM183BQ1AE95 376 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 OR8I2Q8N0Y5 310 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 Q8N6K4 173 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 OR4B1Q8NGF8 309 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 GRAMD2BQ96HH9 432 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 ZNF586Q9NXT0 402 aa8.78□□□□□ -1
VPS33B-204ENST00000554660 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 IGHV1-3A0A0C4DH29 117 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 TRBV6-1A0A0K0K1D8 114 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 FAM231BA6NCW3 169 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 PEX7O00628 323 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 SERF1AO75920 110 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 OR2J3O76001 311 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 IGHG4P01861 327 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 CRYGBP07316 175 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 HIST1H1EP10412 219 aaKnown RBP8.77□□□□□ -1.01
VPS33B-204ENST00000554660 RAB4AP20338 218 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 EBI3Q14213 229 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 C19orf35Q6ZS72 473 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 BAGE3Q86Y29 109 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 BAGE2Q86Y30 109 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 KCNS1Q96KK3 526 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 ZMAT4Q9H898 229 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 GNB4Q9HAV0 340 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 ZNF355PQ9NSJ1 428 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 ZNF492Q9P255 531 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 NAT8BQ9UHF3 227 aa8.77□□□□□ -1.01
VPS33B-204ENST00000554660 IGLC7A0M8Q6 106 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 M0R143 59 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 GPX1P07203 203 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 PSMB8P28062 276 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 INSL3P51460 131 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 KLF5Q13887 457 aaPredicted RBP8.76□□□□□ -1.01
VPS33B-204ENST00000554660 USF2Q15853 346 aaPredicted RBP8.76□□□□□ -1.01
VPS33B-204ENST00000554660 PRSS8Q16651 343 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 Q6ZWC4 215 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 FXYD5Q96DB9 178 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 FNDC4Q9H6D8 234 aaPredicted RBP8.76□□□□□ -1.01
VPS33B-204ENST00000554660 ZNF331Q9NQX6 463 aaPredicted RBP8.76□□□□□ -1.01
VPS33B-204ENST00000554660 TMEM14CQ9P0S9 112 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 RNF24Q9Y225 148 aa8.76□□□□□ -1.01
VPS33B-204ENST00000554660 PLECQ15149 4684 aaKnown RBP8.76□□□□□ -1.01
VPS33B-204ENST00000554660 NUPR1O60356 82 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 SAP30O75446 220 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 GP9P14770 177 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 RPL27AP46776 148 aaKnown RBP8.75□□□□□ -1.01
VPS33B-204ENST00000554660 NUTF2P61970 127 aaKnown RBP8.75□□□□□ -1.01
VPS33B-204ENST00000554660 OR5I1Q13606 314 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 PATE2Q6UY27 113 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 C5orf17Q8NAS9 161 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 OR1N2Q8NGR9 330 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 MYOZ3Q8TDC0 251 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 TSKUQ8WUA8 353 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 NPIPB3Q92617 1050 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 FMC1Q96HJ9 113 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 RASL11BQ9BPW5 248 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 MIEN1Q9BRT3 115 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 SAMD10Q9BYL1 202 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 KLK15Q9H2R5 256 aa8.75□□□□□ -1.01
VPS33B-204ENST00000554660 C20orf202A1L168 122 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 BMPR1BO00238 502 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 ZNF253O75346 499 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 TOMM40O96008 361 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 MOSP00540 346 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 APCSP02743 223 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 MRGPRG-AS1Q2M3A8 158 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 S100A7AQ86SG5 101 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 GPR82Q96P67 336 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 ATG101Q9BSB4 218 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 KRTAP17-1Q9BYP8 105 aa8.74□□□□□ -1.01
VPS33B-204ENST00000554660 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
VPS33B-204ENST00000554660 EDA2RQ9HAV5 297 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms