RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PDE6DO43924 150 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 OR7C2O60412 319 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 IL4P05112 153 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 BMI1P35226 326 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 APOC4P55056 127 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 SOHLH1Q5JUK2 328 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 CEMP1Q6PRD7 247 aaPredicted RBP7.78□□□□□ -1.16
SHMT2-215ENST00000554656 IQCF2Q8IXL9 164 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 KIR2DL5AQ8N109 375 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 KIR2DL5BQ8NHK3 375 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 SHANK2-AS3Q9BTD1 123 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 PAXXQ9BUH6 204 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 C20orf24Q9BUV8 137 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 SLC25A2Q9BXI2 301 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 SLC25A39Q9BZJ4 359 aaPredicted RBP7.78□□□□□ -1.16
SHMT2-215ENST00000554656 OR51M1Q9H341 326 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 TMPRSS5Q9H3S3 457 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 DOK5Q9P104 306 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 C9JQL5 133 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 C11orf94C9JXX5 98 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 K7EMT4 169 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 UBE2CO00762 179 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 PAGE4O60829 102 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 ADCYAP1P18509 176 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 FAM74A3Q4VXF1 159 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 CCDC28AQ8IWP9 274 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 SVBPQ8N300 66 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 TCEAL7Q9BRU2 100 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 MAP6D1Q9H9H5 199 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 SMPXQ9UHP9 88 aa7.77□□□□□ -1.17
SHMT2-215ENST00000554656 AGRNO00468 2067 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 OR4C46A6NHA9 309 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 FAM74A7A6NL05 159 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 CHEK1O14757 476 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 SNAPINO95295 136 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 APOC3P02656 99 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 ATF4P18848 351 aaPredicted RBP7.76□□□□□ -1.17
SHMT2-215ENST00000554656 UBE2L3P68036 154 aaKnown RBP7.76□□□□□ -1.17
SHMT2-215ENST00000554656 BPIFA4PQ86YQ2 179 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 C11orf52Q96A22 123 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 GPR82Q96P67 336 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 UHRF2Q96PU4 802 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 ZFAND3Q9H8U3 227 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 RABAC1Q9UI14 185 aa7.76□□□□□ -1.17
SHMT2-215ENST00000554656 PUS1Q9Y606 427 aaKnown RBP eCLIP7.76□□□□□ -1.17
SHMT2-215ENST00000554656 IGHV7-4-1A0A0J9YVY3 117 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 ZNF98A6NK75 572 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 EIF3GO75821 320 aaKnown RBP eCLIP7.75□□□□□ -1.17
SHMT2-215ENST00000554656 HIST1H1EP10412 219 aaKnown RBP7.75□□□□□ -1.17
SHMT2-215ENST00000554656 USF2Q15853 346 aaPredicted RBP7.75□□□□□ -1.17
SHMT2-215ENST00000554656 MORN5Q5VZ52 161 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 FAM90A2PQ658T7 463 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 TOMM20LQ6UXN7 152 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 LYPD1Q8N2G4 141 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 RPUSD4Q96CM3 377 aaKnown RBP7.75□□□□□ -1.17
SHMT2-215ENST00000554656 FXYD5Q96DB9 178 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 RHPN1-AS1Q9BWJ2 59 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
SHMT2-215ENST00000554656 IGKV3-7A0A075B6H7 116 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 IGHV3OR16-13A0A075B7E8 117 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 IGHV3-74A0A0B4J1X5 117 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 TRAV5A0A0B4J249 113 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 NBEAP1P0C6P0 100 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 RPL7P18124 248 aaKnown RBP7.74□□□□□ -1.17
SHMT2-215ENST00000554656 TFPI2P48307 235 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
SHMT2-215ENST00000554656 PDE6HQ13956 83 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 C1orf194Q5T5A4 169 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 CST9LP1Q5W188 147 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 PHLDA1Q8WV24 401 aaPredicted RBP7.74□□□□□ -1.17
SHMT2-215ENST00000554656 NIPSNAP3BQ9BS92 247 aa7.74□□□□□ -1.17
SHMT2-215ENST00000554656 MRPS12O15235 138 aaKnown RBP7.73□□□□□ -1.17
SHMT2-215ENST00000554656 ZNF253O75346 499 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 APOHP02749 345 aaPredicted RBP7.73□□□□□ -1.17
SHMT2-215ENST00000554656 OR10J4P0C629 311 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 PYYP10082 97 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 ATP5G3P48201 142 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 MEOX2P50222 304 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 UBE2G2P60604 165 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 GBGT1Q8N5D6 347 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 FAM24BQ8N5W8 94 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 ARL6IP6Q8N6S5 226 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 TVP23CQ96ET8 276 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 METTL26Q96S19 204 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 KLK5Q9Y337 293 aaPredicted RBP7.73□□□□□ -1.17
SHMT2-215ENST00000554656 YTHDF2Q9Y5A9 579 aaKnown RBP7.73□□□□□ -1.17
SHMT2-215ENST00000554656 U3KQE9 123 aa7.73□□□□□ -1.17
SHMT2-215ENST00000554656 B4DEV8 164 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 IGLC2P0DOY2 106 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 CRYBB3P26998 211 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 NANOS2P60321 138 aaKnown RBP7.72□□□□□ -1.17
SHMT2-215ENST00000554656 RHEBQ15382 184 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 CSTL1Q9H114 145 aa7.72□□□□□ -1.17
SHMT2-215ENST00000554656 PARLQ9H300 379 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms