RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 FAM236AA0A1B0GUQ0 79 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 FAM236BA0A1B0GV22 79 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 GRIFINA4D1Z8 144 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 PRSS46E5RG02 174 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 J3QRE1 110 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 HMGN4O00479 90 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 FCN1O00602 326 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 FFAR1O14842 300 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 CXCL13O43927 109 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 LMX1BO60663 402 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 PGLYRP1O75594 196 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-227ENST00000554491 DEDDO75618 318 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 NEURL1O76050 574 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 ZFAND5O76080 213 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 NDUFB4O95168 129 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 TRACP01848 142 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 CD3DP04234 171 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 CBLN1P23435 193 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 AQP1P29972 269 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 MPV17P39210 176 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 PTGDSP41222 190 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 INSL3P51460 131 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 LIM2P55344 173 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 LOXL1Q08397 574 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-227ENST00000554491 UNC119Q13432 240 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 INSL4Q14641 139 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 Q71RC1 249 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-227ENST00000554491 HAPLN4Q86UW8 402 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 TEN1Q86WV5 123 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF584Q8IVC4 421 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 TEX45Q8NA69 505 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 MORN4Q8NDC4 146 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 NFAM1Q8NET5 270 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-227ENST00000554491 RPS4Y2Q8TD47 263 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 ZC2HC1AQ96GY0 325 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 COX14Q96I36 57 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 OR2A5Q96R48 311 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 FOXC2Q99958 501 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 SMIM7Q9BQ49 75 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 MRPL20Q9BYC9 149 aaKnown RBP3.47□□□□□ -1.85
ATXN3-227ENST00000554491 SPRY4Q9C004 299 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 PARP12Q9H0J9 701 aaKnown RBP3.47□□□□□ -1.85
ATXN3-227ENST00000554491 V9GY05 133 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 ARL2-SNX15V9GYD0 113 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 CUBNO60494 3623 aa3.46□□□□□ -1.85
ATXN3-227ENST00000554491 TLN2Q9Y4G6 2542 aa3.46□□□□□ -1.85
ATXN3-227ENST00000554491 TRBV7-7A0A0K0K1E9 115 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 TEX50A0A1B0GTY4 177 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 A0A1B0GUV1 79 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 TMEM202A6NGA9 273 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 C2orf70A6NJV1 201 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 H3BTX0 84 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 H7C1H1 209 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 SPINT2O43291 252 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 SPRY3O43610 288 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 IGF1P05019 195 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 P0DMU3 169 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 FAM231AP0DMU4 169 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 FAM231CP0DMU5 169 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 CRYGSP22914 178 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 HLA-DMBP28068 263 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 MAGEA5P43359 124 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 PRDX1Q06830 199 aaKnown RBP3.46□□□□□ -1.86
ATXN3-227ENST00000554491 FAM27E3Q08E93 113 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 EBI3Q14213 229 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 KRTAP24-1Q3LI83 254 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 DMRTC1Q5HYR2 192 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 FAM27D1Q5T7N8 215 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 SERTAD4-AS1Q5TG53 156 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 FAM166AQ6J272 317 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 Q6ZS49 121 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 RPS19BP1Q86WX3 136 aaKnown RBP3.46□□□□□ -1.86
ATXN3-227ENST00000554491 HOGA1Q86XE5 327 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 SBSPONQ8IVN8 264 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 C11orf53Q8IXP5 236 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 VKORC1L1Q8N0U8 176 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 ANKRD29Q8N6D5 301 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 TSKUQ8WUA8 353 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 CARD19Q96LW7 228 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 TMEM147Q9BVK8 224 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 C1QTNF5Q9BXJ0 243 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF442Q9H7R0 627 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 GNB4Q9HAV0 340 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 KCNIP2Q9NS61 270 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 SLC39A9Q9NUM3 307 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 OCIAD1Q9NX40 245 aa3.46□□□□□ -1.86
ATXN3-227ENST00000554491 PIKFYVEQ9Y2I7 2098 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 TRAV4A0A0B4J268 109 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 OOSP1A8MZH6 123 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 TMEM150CB9EJG8 249 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 NDUFC2-KCTD14E9PQ53 114 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 C19orf84I3L1E1 186 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 APCSP02743 223 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 COX7CP15954 63 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 SSR2P43308 183 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 EMDP50402 254 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 RPS21P63220 83 aaKnown RBP3.45□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF117Q03924 483 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 KLF5Q13887 457 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms