RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 C3orf56Q8N813 242 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 DCANP1Q8TF63 244 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 C16orf92Q96LL3 132 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 SPAG8Q99932 426 aaPredicted RBP5.77□□□□□ -1.49
TDP1-209ENST00000554180 NIPSNAP3BQ9BS92 247 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 MS4A6AQ9H2W1 248 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 PARLQ9H300 379 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 KLF12Q9Y4X4 402 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 FBN1P35555 2871 aaKnown RBP5.77□□□□□ -1.49
TDP1-209ENST00000554180 TRAV8-2A0A0B4J237 113 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 TRBV6-1A0A0K0K1D8 114 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 RBAKDNA6NC62 111 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 C9JCJ5 164 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 DIRC3C9JPN6 131 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 K7EQG2 157 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 DNASE2O00115 360 aaPredicted RBP5.76□□□□□ -1.49
TDP1-209ENST00000554180 SAP30O75446 220 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 IGLV1-51P01701 117 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 CEBPGP53567 150 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 TAS2R60P59551 318 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 SNRPD3P62318 126 aaKnown RBP5.76□□□□□ -1.49
TDP1-209ENST00000554180 PNRC1Q12796 327 aaPredicted RBP5.76□□□□□ -1.49
TDP1-209ENST00000554180 PSG3Q16557 428 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 RBPMS2Q6ZRY4 209 aaKnown RBP5.76□□□□□ -1.49
TDP1-209ENST00000554180 TMEM61Q8N0U2 210 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 TMEM75Q8N9X5 138 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 SMIM12Q96EX1 92 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 FMC1Q96HJ9 113 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 LINC00052Q96N35 136 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 SMIM7Q9BQ49 75 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 MCRIP2Q9BUT9 160 aaKnown RBP5.76□□□□□ -1.49
TDP1-209ENST00000554180 LY96Q9Y6Y9 160 aa5.76□□□□□ -1.49
TDP1-209ENST00000554180 NOTCH3Q9UM47 2321 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 OR4C46A6NHA9 309 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 ZNF727A8MUV8 499 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 M0R3E3 92 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 RPL35P42766 123 aaKnown RBP5.75□□□□□ -1.49
TDP1-209ENST00000554180 UBE2G1P62253 170 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 GNG5P63218 68 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 TMEM183BQ1AE95 376 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 CD300EQ496F6 205 aaPredicted RBP5.75□□□□□ -1.49
TDP1-209ENST00000554180 LCN12Q6JVE5 192 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 GOLT1AQ6ZVE7 132 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 SVBPQ8N300 66 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 WFDC9Q8NEX5 89 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 DERL1Q9BUN8 251 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 NAT8Q9UHE5 227 aa5.75□□□□□ -1.49
TDP1-209ENST00000554180 VWFP04275 2813 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 TRBV20OR9-2A0A075B6H5 130 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 IGKV3-7A0A075B6H7 116 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 SNAPINO95295 136 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 LTAP01374 205 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 APOC3P02656 99 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 GNG4P50150 75 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 TMEM241Q24JQ0 296 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 ZNF674Q2M3X9 581 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 CENPWQ5EE01 88 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 C9orf66Q5T8R8 295 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 GBGT1Q8N5D6 347 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 RNF182Q8N6D2 247 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 ZNF738Q8NE65 137 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 TVP23CQ96ET8 276 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 IGF2BP2-AS1Q96M15 143 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 FAM110AQ9BQ89 295 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 PPP1R14DQ9NXH3 145 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 RPH3ALQ9UNE2 315 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 ZFP30Q9Y2G7 519 aa5.74□□□□□ -1.49
TDP1-209ENST00000554180 TRBV7-9A0A0J9YWB2 115 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 WIPF1O43516 503 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 IGLV2-11P01706 119 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 CD33P20138 364 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 HLA-DMBP28068 263 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 CMC4P56277 68 aaPredicted RBP5.73□□□□□ -1.49
TDP1-209ENST00000554180 FLI1Q01543 452 aaPredicted RBP5.73□□□□□ -1.49
TDP1-209ENST00000554180 IGFL4Q6B9Z1 124 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 C9orf47Q6ZRZ4 202 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 Q86TA4 180 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 LINC01551Q86U37 167 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 OR10J6PQ8NGY7 276 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 C20orf173Q96LM9 149 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 GPR61Q9BZJ8 451 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 SDF2L1Q9HCN8 221 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 LENEPQ9Y5L5 61 aa5.73□□□□□ -1.49
TDP1-209ENST00000554180 IGKV2-40A0A087WW87 121 aaPredicted RBP5.72□□□□□ -1.49
TDP1-209ENST00000554180 TRAV8-1A0A0A6YYK1 113 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 TRAV34A0A0B4J273 112 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 ZNF705FA8MVS1 300 aaPredicted RBP5.72□□□□□ -1.49
TDP1-209ENST00000554180 B4DEV8 164 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 NPIPB6E9PJ23 425 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 IGKV2D-40P01614 121 aaPredicted RBP5.72□□□□□ -1.49
TDP1-209ENST00000554180 ZNF688P0C7X2 276 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 TFPI2P48307 235 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 RIPPLY3P57055 190 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 RHEBQ15382 184 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 GUCA2BQ16661 112 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 PSMG4Q5JS54 123 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 SAPCD1Q5SSQ6 148 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 TMEM78Q5T7P6 136 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 FOXI2Q6ZQN5 318 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 COX8CQ7Z4L0 72 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms