RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 MRPL53Q96EL3 112 aaKnown RBP13.57□□□□□ -0.24
PSEN1-210ENST00000554131 CLEC5AQ9NY25 188 aa13.57□□□□□ -0.24
PSEN1-210ENST00000554131 HLA-DRB4X5D2U9 266 aa13.57□□□□□ -0.24
PSEN1-210ENST00000554131 RANP62826 216 aaKnown RBP13.56□□□□□ -0.24
PSEN1-210ENST00000554131 ICAM4Q14773 271 aa13.56□□□□□ -0.24
PSEN1-210ENST00000554131 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
PSEN1-210ENST00000554131 Q9H3A6 140 aa13.56□□□□□ -0.24
PSEN1-210ENST00000554131 TUBA4BQ9H853 241 aa13.56□□□□□ -0.24
PSEN1-210ENST00000554131 TMEM167BQ9NRX6 74 aa13.56□□□□□ -0.24
PSEN1-210ENST00000554131 SFT2D1Q8WV19 159 aa13.55□□□□□ -0.24
PSEN1-210ENST00000554131 RPUSD4Q96CM3 377 aaKnown RBP13.55□□□□□ -0.24
PSEN1-210ENST00000554131 PRELID1Q9Y255 219 aa13.55□□□□□ -0.24
PSEN1-210ENST00000554131 LOC102724200A0A096LPH7 203 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-210ENST00000554131 TRAV1-1A0A0B4J248 108 aa13.54□□□□□ -0.24
PSEN1-210ENST00000554131 H2AFB1P0C5Y9 115 aa13.54□□□□□ -0.24
PSEN1-210ENST00000554131 ZNF705DP0CH99 300 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-210ENST00000554131 ZNF705BP0CI00 300 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-210ENST00000554131 OR8A1Q8NGG7 326 aa13.54□□□□□ -0.24
PSEN1-210ENST00000554131 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
PSEN1-210ENST00000554131 OTORQ9NRC9 128 aa13.54□□□□□ -0.24
PSEN1-210ENST00000554131 GGTLC3B5MD39 225 aa13.53□□□□□ -0.24
PSEN1-210ENST00000554131 GIG44P09565 113 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-210ENST00000554131 RPL35AP18077 110 aaKnown RBP13.53□□□□□ -0.24
PSEN1-210ENST00000554131 CCL20P78556 96 aa13.53□□□□□ -0.24
PSEN1-210ENST00000554131 TEX261Q6UWH6 196 aa13.53□□□□□ -0.24
PSEN1-210ENST00000554131 AMTNQ6UX39 209 aa13.53□□□□□ -0.24
PSEN1-210ENST00000554131 STHQ8IWL8 128 aa13.53□□□□□ -0.24
PSEN1-210ENST00000554131 AAMDCQ9H7C9 122 aa13.53□□□□□ -0.24
PSEN1-210ENST00000554131 YTHDF2Q9Y5A9 579 aaKnown RBP13.53□□□□□ -0.24
PSEN1-210ENST00000554131 CNN1P51911 297 aaKnown RBP13.52□□□□□ -0.25
PSEN1-210ENST00000554131 HAGHQ16775 308 aa13.52□□□□□ -0.25
PSEN1-210ENST00000554131 EBLN2Q6P2I7 272 aa13.52□□□□□ -0.25
PSEN1-210ENST00000554131 SBSPONQ8IVN8 264 aa13.52□□□□□ -0.25
PSEN1-210ENST00000554131 B9D2Q9BPU9 175 aa13.52□□□□□ -0.25
PSEN1-210ENST00000554131 KIR2DL5BA0A0G2JN68 375 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 KIR2DL5BA0A0G2JPC4 375 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 A0A1B0GV50 99 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 A0A1W2PRE2 83 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 PGPA6NDG6 321 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 FAM74A7A6NL05 159 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 ZNF705EA8MWA4 302 aaPredicted RBP13.51□□□□□ -0.25
PSEN1-210ENST00000554131 IQCF2Q8IXL9 164 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 KIR2DL5AQ8N109 375 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 KIR2DL5BQ8NHK3 375 aa13.51□□□□□ -0.25
PSEN1-210ENST00000554131 HUWE1Q7Z6Z7 4374 aaKnown RBP13.5□□□□□ -0.25
PSEN1-210ENST00000554131 NPIPB6E9PJ23 425 aa13.5□□□□□ -0.25
PSEN1-210ENST00000554131 ARL6IP6Q8N6S5 226 aa13.5□□□□□ -0.25
PSEN1-210ENST00000554131 ZNF680Q8NEM1 530 aa13.5□□□□□ -0.25
PSEN1-210ENST00000554131 COL7A1Q02388 2944 aa13.49□□□□□ -0.25
PSEN1-210ENST00000554131 DIRC3C9JPN6 131 aa13.49□□□□□ -0.25
PSEN1-210ENST00000554131 DUSP14O95147 198 aaKnown RBP13.49□□□□□ -0.25
PSEN1-210ENST00000554131 UBE2G2P60604 165 aa13.49□□□□□ -0.25
PSEN1-210ENST00000554131 HIST1H1AQ02539 215 aaPredicted RBP13.49□□□□□ -0.25
PSEN1-210ENST00000554131 CCDC28AQ8IWP9 274 aa13.49□□□□□ -0.25
PSEN1-210ENST00000554131 LYPD6BQ8NI32 183 aa13.49□□□□□ -0.25
PSEN1-210ENST00000554131 ARL2-SNX15V9GYD0 113 aa13.49□□□□□ -0.25
PSEN1-210ENST00000554131 IGKV2-40A0A087WW87 121 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-210ENST00000554131 IGKV2D-40P01614 121 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-210ENST00000554131 IGKV3-20P01619 116 aa13.48□□□□□ -0.25
PSEN1-210ENST00000554131 SUMO1P63165 101 aaKnown RBP13.48□□□□□ -0.25
PSEN1-210ENST00000554131 GNG5P63218 68 aa13.48□□□□□ -0.25
PSEN1-210ENST00000554131 OR4B1Q8NGF8 309 aa13.48□□□□□ -0.25
PSEN1-210ENST00000554131 ASCL2Q99929 193 aa13.48□□□□□ -0.25
PSEN1-210ENST00000554131 TM2D3Q9BRN9 247 aa13.48□□□□□ -0.25
PSEN1-210ENST00000554131 CSTL1Q9H114 145 aa13.48□□□□□ -0.25
PSEN1-210ENST00000554131 HBE1P02100 147 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 APOC4P55056 127 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 ERCC8Q13216 396 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 PMS2P11Q13670 270 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 MORN3Q6PF18 240 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-210ENST00000554131 C9orf47Q6ZRZ4 202 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 C5orf17Q8NAS9 161 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 RXFP4Q8TDU9 374 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 VGLL1Q99990 258 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 SLC35B3Q9H1N7 401 aa13.47□□□□□ -0.25
PSEN1-210ENST00000554131 RBAKDNA6NC62 111 aa13.46□□□□□ -0.25
PSEN1-210ENST00000554131 PAGE4O60829 102 aa13.46□□□□□ -0.25
PSEN1-210ENST00000554131 SLC25A5P05141 298 aaKnown RBP13.46□□□□□ -0.25
PSEN1-210ENST00000554131 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
PSEN1-210ENST00000554131 BLOC1S1P78537 153 aa13.46□□□□□ -0.25
PSEN1-210ENST00000554131 CSNK1G2-AS1Q8NCQ2 148 aa13.46□□□□□ -0.25
PSEN1-210ENST00000554131 OR10J6PQ8NGY7 276 aa13.46□□□□□ -0.25
PSEN1-210ENST00000554131 FAM19A4Q96LR4 140 aa13.46□□□□□ -0.25
PSEN1-210ENST00000554131 UBE2CO00762 179 aa13.45□□□□□ -0.26
PSEN1-210ENST00000554131 CA1P00915 261 aaPredicted RBP13.45□□□□□ -0.26
PSEN1-210ENST00000554131 TCRAP04437 139 aa13.45□□□□□ -0.26
PSEN1-210ENST00000554131 CSN1S1P47710 185 aa13.45□□□□□ -0.26
PSEN1-210ENST00000554131 ATP5G3P48201 142 aa13.45□□□□□ -0.26
PSEN1-210ENST00000554131 IFITM2Q01629 132 aa13.45□□□□□ -0.26
PSEN1-210ENST00000554131 NKX6-2Q9C056 277 aaPredicted RBP13.45□□□□□ -0.26
PSEN1-210ENST00000554131 EPDR1Q9UM22 224 aa13.45□□□□□ -0.26
PSEN1-210ENST00000554131 CRXO43186 299 aaPredicted RBP13.44□□□□□ -0.26
PSEN1-210ENST00000554131 PPT1P50897 306 aa13.44□□□□□ -0.26
PSEN1-210ENST00000554131 FXYD7P58549 80 aa13.44□□□□□ -0.26
PSEN1-210ENST00000554131 CMTM2Q8TAZ6 248 aa13.44□□□□□ -0.26
PSEN1-210ENST00000554131 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
PSEN1-210ENST00000554131 TEX46H3BTG2 121 aa13.43□□□□□ -0.26
PSEN1-210ENST00000554131 IFNA7P01567 189 aa13.43□□□□□ -0.26
PSEN1-210ENST00000554131 IGLV2-11P01706 119 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms