RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 KLF5Q13887 457 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 ICAM4Q14773 271 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RNF151Q2KHN1 245 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 CD200R1LQ6Q8B3 271 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 LCN15Q6UWW0 184 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 Q6ZTC4 211 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 LINC00305Q7Z4B0 112 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM144Q7Z5S9 345 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RPP25LQ8N5L8 163 aaKnown RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 FAM24BQ8N5W8 94 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 OR10J6PQ8NGY7 276 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 PFDN5Q99471 154 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RNF5Q99942 180 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 MED28Q9H204 178 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 ARV1Q9H2C2 271 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 AAMDCQ9H7C9 122 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 NOP10Q9NPE3 64 aaKnown RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RPRMQ9NS64 109 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 HIGD1AQ9Y241 93 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 A0A0B4J2A0 478 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TRGV4A0A0C4DH28 118 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 KRTAP9-7A8MTY7 169 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM262E9PQX1 116 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 K7EIM0 57 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 CHEK1O14757 476 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 IGKV1-39P01597 117 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 IGLV1-40P01703 118 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 IGKV1D-39P04432 117 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 CD5P06127 495 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SFTA3P0C7M3 94 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 PYYP10082 97 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TBPP20226 339 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 CRYBA4P53673 196 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 PRCDQ00LT1 54 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 OXA1LQ15070 435 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RNF212Q495C1 297 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 FAM222AQ5U5X8 452 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 C10orf113Q5VZT2 155 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SPSB3Q6PJ21 355 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 CD164L2Q6UWJ8 174 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NRARPQ7Z6K4 114 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 Q8N6K4 173 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM229BQ8NBD8 167 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 INO80EQ8NBZ0 244 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 OR5C1Q8NGR4 320 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 OR2T35Q8NGX2 323 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 Q8TAT8 98 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RPUSD4Q96CM3 377 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 C17orf77Q96MU5 243 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SLC25A31Q9H0C2 315 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NRN1Q9NPD7 142 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 BIN3Q9NQY0 253 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SHPKQ9UHJ6 478 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 U3KQ87 197 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NPIPB6E9PJ23 425 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 K7EPK0 472 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 CORTO00230 105 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NHLRC4P0CG21 123 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SMIM18P0DKX4 95 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RNASE2P10153 161 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 GCSHP23434 173 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RAB5CP51148 216 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TMBIM6P55061 237 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 BRWD1-AS2P59051 145 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RPS20P60866 119 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 UBE2L3P68036 154 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 HBG1P69891 147 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 HBG2P69892 147 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RPL19P84098 196 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 ERCC8Q13216 396 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 EBI3Q14213 229 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 CASC10Q5T4H9 136 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 GDF5OSQ5U4N7 250 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TEPPQ6URK8 271 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 EXOC3-AS1Q8N2X6 119 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TTC9CQ8N5M4 171 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 ZNF502Q8TBZ5 544 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RNF141Q8WVD5 230 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM190Q8WZ59 177 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 GALNT14Q96FL9 552 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 OR10C1Q96KK4 312 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 IGF2BP2-AS1Q96M15 143 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 CIB3Q96Q77 187 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NIPSNAP3BQ9BS92 247 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NDUFAF3Q9BU61 184 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NDUFA4L2Q9NRX3 87 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 UQCC1Q9NVA1 299 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 YTHDF2Q9Y5A9 579 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 X6R8D5 127 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 IGLV11-55A0A075B6I3 123 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 IGHV4-28A0A0C4DH34 117 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 C7orf66A4D0T2 115 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NDUFA4O00483 81 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 LECT2O14960 151 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 ORM1P02763 201 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SLC25A5P05141 298 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 MGST1P10620 155 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 C4BPBP20851 252 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SRPXP78539 464 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms