RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 NPIPB5A8MRT5 1133 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 Q6ZVH6 145 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 PMCHL2Q9BQD1 86 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 TRAV30A0A087WSZ9 112 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 Q8TAT8 98 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 TRBV6-1A0A0K0K1D8 114 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 KLRB1Q12918 225 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 RIGQ13278 110 aa11.39□□□□□ -0.59
ACTN1-211ENST00000553882 SERTM2A0A1B0GWG4 89 aa11.38□□□□□ -0.59
ACTN1-211ENST00000553882 TMEM213A2RRL7 107 aa11.38□□□□□ -0.59
ACTN1-211ENST00000553882 CRXO43186 299 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-211ENST00000553882 HLA-DMBP28068 263 aa11.38□□□□□ -0.59
ACTN1-211ENST00000553882 CSN1S1P47710 185 aa11.38□□□□□ -0.59
ACTN1-211ENST00000553882 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
ACTN1-211ENST00000553882 TTC9CQ8N5M4 171 aa11.38□□□□□ -0.59
ACTN1-211ENST00000553882 MSRB2Q9Y3D2 182 aa11.38□□□□□ -0.59
ACTN1-211ENST00000553882 NEU4Q8WWR8 484 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-211ENST00000553882 ITPR1Q14643 2758 aa11.37□□□□□ -0.59
ACTN1-211ENST00000553882 CTSGP08311 255 aa11.37□□□□□ -0.59
ACTN1-211ENST00000553882 PDE6HQ13956 83 aa11.37□□□□□ -0.59
ACTN1-211ENST00000553882 LYZL1Q6UWQ5 148 aa11.37□□□□□ -0.59
ACTN1-211ENST00000553882 AP5S1Q9NUS5 200 aa11.37□□□□□ -0.59
ACTN1-211ENST00000553882 THYN1Q9P016 225 aa11.37□□□□□ -0.59
ACTN1-211ENST00000553882 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 SH2D1AO60880 128 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 FAM106CPP0CH98 169 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 EGR2P11161 476 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-211ENST00000553882 ECSCRQ19T08 205 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 FAM106AQ4KMX7 169 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 Q8N6K4 173 aa11.36□□□□□ -0.59
ACTN1-211ENST00000553882 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
ACTN1-211ENST00000553882 C20orf202A1L168 122 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 GOSR1O95249 250 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 RPL7P18124 248 aaKnown RBP11.35□□□□□ -0.59
ACTN1-211ENST00000553882 GPR183P32249 361 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 S100A7AQ86SG5 101 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 AMN1Q8IY45 258 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 PRSS3P2Q8NHM4 247 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 VGLL1Q99990 258 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 D6R8Y8 96 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 OR5AL1P0C617 328 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 GAGE1Q13065 139 aa11.35□□□□□ -0.59
ACTN1-211ENST00000553882 IFI27P40305 119 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-211ENST00000553882 ZNF48Q96MX3 618 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-211ENST00000553882 RABAC1Q9UI14 185 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 IGHV3OR16-13A0A075B7E8 117 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 IGHV3-74A0A0B4J1X5 117 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 IGHV3-66A0A0C4DH42 116 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-211ENST00000553882 FXYD7P58549 80 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 PSG9Q00887 426 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-211ENST00000553882 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 FA2HQ7L5A8 372 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 Q8N9W7 124 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 PRR25Q96S07 402 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 TMEM191AQ9H0A3 160 aa11.34□□□□□ -0.59
ACTN1-211ENST00000553882 ODF1Q14990 250 aa11.33□□□□□ -0.6
ACTN1-211ENST00000553882 UBTD1Q9HAC8 227 aa11.33□□□□□ -0.6
ACTN1-211ENST00000553882 HSPB8Q9UJY1 196 aa11.33□□□□□ -0.6
ACTN1-211ENST00000553882 Q6AWC8 147 aa11.33□□□□□ -0.6
ACTN1-211ENST00000553882 IGHG4P01861 327 aa11.32□□□□□ -0.6
ACTN1-211ENST00000553882 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
ACTN1-211ENST00000553882 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
ACTN1-211ENST00000553882 HSBP1L1C9JCN9 74 aa11.32□□□□□ -0.6
ACTN1-211ENST00000553882 MINOS1Q5TGZ0 78 aa11.32□□□□□ -0.6
ACTN1-211ENST00000553882 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
ACTN1-211ENST00000553882 MINOS1-NBL1R4GNA1 71 aa11.32□□□□□ -0.6
ACTN1-211ENST00000553882 LINC01548A6NM66 108 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 SMKR1H3BMG3 65 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 ATP6V0E1O15342 81 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 TCF21O43680 179 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 NCR2O95944 276 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 CLEC3BP05452 202 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 UCNP55089 124 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 EBI3Q14213 229 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 A0A1B0GW15 77 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 G3V318 75 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 SAA4P35542 130 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 RHOGP84095 191 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 ERCC8Q13216 396 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 PET117Q6UWS5 81 aa11.31□□□□□ -0.6
ACTN1-211ENST00000553882 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 LY6DQ14210 128 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 TWIST1Q15672 202 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 ZNF493Q6ZR52 646 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 PRELID3AQ96N28 172 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms