RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FXYD6-FXYD2A0A087WZ82 144 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 BORCS7-ASMTA0A0B4J1R7 106 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 A0A0J9YWU9 116 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 A0A0J9YX75 114 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 SOCS3O14543 225 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-209ENST00000553855 PSG3Q16557 428 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 ACOT6Q3I5F7 207 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-209ENST00000553855 FFAR4Q5NUL3 377 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 ZFAND6Q6FIF0 208 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 OR2T35Q8NGX2 323 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 OR10J6PQ8NGY7 276 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 TMEM208Q9BTX3 173 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 MFFQ9GZY8 342 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 HRH4Q9H3N8 390 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 AAMDCQ9H7C9 122 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 XCL2Q9UBD3 114 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 GOLT1BQ9Y3E0 138 aa6.1□□□□□ -1.43
PSEN1-209ENST00000553855 A0A1W2PPV4 95 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 CXorf65A6NEN9 183 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 OR7C2O60412 319 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 HIST1H1EP10412 219 aaKnown RBP6.09□□□□□ -1.43
PSEN1-209ENST00000553855 MIFP14174 115 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 FAM3BP58499 235 aaPredicted RBP6.09□□□□□ -1.43
PSEN1-209ENST00000553855 RNF182Q8N6D2 247 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 RPUSD4Q96CM3 377 aaKnown RBP6.09□□□□□ -1.43
PSEN1-209ENST00000553855 PARD6GQ9BYG4 376 aaPredicted RBP6.09□□□□□ -1.43
PSEN1-209ENST00000553855 ZNF331Q9NQX6 463 aaPredicted RBP6.09□□□□□ -1.43
PSEN1-209ENST00000553855 TMEM14CQ9P0S9 112 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 FUT9Q9Y231 359 aa6.09□□□□□ -1.43
PSEN1-209ENST00000553855 IGHV3OR16-12A0A075B7B8 117 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 TRAV5A0A0B4J249 113 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 F6UB75 175 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 H3BTX0 84 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 ZNF253O75346 499 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 INSP01308 110 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 MBP02144 154 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
PSEN1-209ENST00000553855 C4BPBP20851 252 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 TSPOP30536 169 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 CNN1P51911 297 aaKnown RBP6.08□□□□□ -1.44
PSEN1-209ENST00000553855 FXYD7P58549 80 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 PDE6HQ13956 83 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 KHDC3LQ587J8 217 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 CASC10Q5T4H9 136 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 GDF5OSQ5U4N7 250 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 IGFL4Q6B9Z1 124 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 OR8A1Q8NGG7 326 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 BLNKQ8WV28 456 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 C20orf173Q96LM9 149 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 AQP10Q96PS8 301 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 PAXXQ9BUH6 204 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 OR51M1Q9H341 326 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 C11orf68Q9H3H3 251 aaKnown RBP6.08□□□□□ -1.44
PSEN1-209ENST00000553855 PRELID1Q9Y255 219 aa6.08□□□□□ -1.44
PSEN1-209ENST00000553855 KLK5Q9Y337 293 aaPredicted RBP6.08□□□□□ -1.44
PSEN1-209ENST00000553855 TRBV19A0A075B6N1 114 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 TRAV8-2A0A0B4J237 113 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 TMEM189A5PLL7 270 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 SMIM9A6NGZ8 99 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 MRPS12O15235 138 aaKnown RBP6.07□□□□□ -1.44
PSEN1-209ENST00000553855 HBE1P02100 147 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 NBEAP1P0C6P0 100 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 IGLC2P0DOY2 106 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 M6PRP20645 277 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 CSN1S1P47710 185 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 DEFB1P60022 68 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 UBE2L3P68036 154 aaKnown RBP6.07□□□□□ -1.44
PSEN1-209ENST00000553855 GCSAMLQ5JQS6 135 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 FAM74A1Q5RGS3 127 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 MIR17HGQ75NE6 70 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 HSD17B11Q8NBQ5 300 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 GNPNAT1Q96EK6 184 aaPredicted RBP6.07□□□□□ -1.44
PSEN1-209ENST00000553855 C17orf77Q96MU5 243 aa6.07□□□□□ -1.44
PSEN1-209ENST00000553855 EPPK1P58107 5090 aaKnown RBP6.07□□□□□ -1.44
PSEN1-209ENST00000553855 IGHV4-28A0A0C4DH34 117 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 TEX48A0A1B0GUV7 120 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 NUPR2A6NF83 97 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 ZNF705EA8MWA4 302 aaPredicted RBP6.06□□□□□ -1.44
PSEN1-209ENST00000553855 H3BQ15 152 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 BOLA2-SMG1P6H3BVE0 249 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 TAAR5O14804 337 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 JTBO76095 146 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 PYYP10082 97 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 RRN3P1Q2M238 152 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 MORN5Q5VZ52 161 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 OR10G4Q8NGN3 311 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 OR10G9Q8NGN4 311 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 OR10G7Q8NGN6 311 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 MRPL53Q96EL3 112 aaKnown RBP6.06□□□□□ -1.44
PSEN1-209ENST00000553855 IGF2BP2-AS1Q96M15 143 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 SLC25A2Q9BXI2 301 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 SLC35B3Q9H1N7 401 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 ZNF586Q9NXT0 402 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 TNFSF18Q9UNG2 199 aa6.06□□□□□ -1.44
PSEN1-209ENST00000553855 RFNGQ9Y644 331 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms