RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CDC26Q8NHZ8 85 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 MCFD2Q8NI22 146 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 STAG3L4Q8TBR4 150 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 RPS4Y2Q8TD47 263 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 SLC35B4Q969S0 331 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 MRPS24Q96EL2 167 aaKnown RBP1.61□□□□□ -2.15
SCFD1-210ENST00000553693 TVP23CQ96ET8 276 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 TSPAN32Q96QS1 320 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 C16orf95Q9H693 158 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 NMNAT1Q9HAN9 279 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-210ENST00000553693 POPDC3Q9HBV1 291 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 TAAR3PQ9P1P4 343 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF391Q9UJN7 358 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 ANAPC10Q9UM13 185 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 PLXNB1O43157 2135 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 IGKV1D-37A0A075B6S9 117 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 A0A1B0GU33 70 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 TMEM269A0A1B0GVZ9 245 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 TMEM235A6NFC5 223 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 KNCNA6PVL3 124 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 VGLL3A8MV65 326 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 CLDN25C9JDP6 229 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 G3V3Q6 166 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 COX7A2LO14548 114 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 CREBL2O60519 120 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-210ENST00000553693 TCRBP04435 133 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 CTXN2P0C2S0 81 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 HRES1P13985 223 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 HSD11B1P28845 292 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 S100A7P31151 101 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 GLRXP35754 106 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 SERPINB10P48595 397 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 ERVS71-1P61550 626 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 RPL30P62888 115 aaKnown RBP1.6□□□□□ -2.15
SCFD1-210ENST00000553693 GLO1Q04760 184 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 C3orf33Q6P1S2 294 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 SFXN4Q6P4A7 337 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 RPS27LQ71UM5 84 aaKnown RBP1.6□□□□□ -2.15
SCFD1-210ENST00000553693 AAED1Q7RTV5 226 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 LYPD6Q86Y78 171 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF664Q8N3J9 261 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 TMEM86BQ8N661 226 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 ANKRD29Q8N6D5 301 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 OR5C1Q8NGR4 320 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 OR1L8Q8NGR8 309 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 OR4X1Q8NH49 305 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 LHFPL5Q8TAF8 219 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 MUC7Q8TAX7 377 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 MAGOHBQ96A72 148 aaKnown RBP1.6□□□□□ -2.15
SCFD1-210ENST00000553693 ZHX1-C8orf76Q96EF9 292 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 NMNAT3Q96T66 252 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 CCDC90BQ9GZT6 254 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 TAS2R7Q9NYW3 318 aa1.6□□□□□ -2.15
SCFD1-210ENST00000553693 PLECQ15149 4684 aaKnown RBP1.6□□□□□ -2.15
SCFD1-210ENST00000553693 KIAA1109Q2LD37 5005 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 ABCA13Q86UQ4 5058 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 GNG14A0A1W2PPG7 69 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 PQLC2LA1A4F0 135 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 C9JCJ5 164 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 H3BPC8 53 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 NOS1APO75052 506 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-210ENST00000553693 CNIH1O95406 144 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 SERPINA1P01009 418 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 CTSGP08311 255 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 GZMBP10144 247 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF22P17026 224 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-210ENST00000553693 BLVRBP30043 206 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-210ENST00000553693 CSN1S1P47710 185 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 LSM6P62312 80 aaKnown RBP1.59□□□□□ -2.15
SCFD1-210ENST00000553693 HIST1H3AP68431 136 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 PSG4Q00888 419 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 CDK10Q15131 360 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 ACOT6Q3I5F7 207 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-210ENST00000553693 LIN52Q52LA3 116 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 TMEM97Q5BJF2 176 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 LPCAT3Q6P1A2 487 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 LRRC28Q86X40 367 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-210ENST00000553693 MMGT1Q8N4V1 131 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 DEFB125Q8N687 156 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 Q8NAQ8 132 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 WFDC9Q8NEX5 89 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 DGCR14Q96DF8 476 aaKnown RBP1.59□□□□□ -2.15
SCFD1-210ENST00000553693 SFRP2Q96HF1 295 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 LINC00470Q9BZP3 86 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 ACER3Q9NUN7 267 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 PCTPQ9UKL6 214 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 PRELID1Q9Y255 219 aa1.59□□□□□ -2.15
SCFD1-210ENST00000553693 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.16
SCFD1-210ENST00000553693 DSPPQ9NZW4 1301 aa1.59□□□□□ -2.16
SCFD1-210ENST00000553693 STARD9Q9P2P6 4700 aa1.59□□□□□ -2.16
SCFD1-210ENST00000553693 WNK2Q9Y3S1 2297 aa1.59□□□□□ -2.16
SCFD1-210ENST00000553693 LYSTQ99698 3801 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 TRBV20OR9-2A0A075B6H5 130 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 IGLV3-9A0A075B6K5 115 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 FAM159BA6NKW6 160 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 I3L521 148 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 CHP2O43745 196 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 NPYP01303 97 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 HLA-DRB1P01911 266 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 HMGN2P05204 90 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms