RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 OR8A1Q8NGG7 326 aa10.18□□□□□ -0.78
TUBB3-202ENST00000553656 OR10J6PQ8NGY7 276 aa10.18□□□□□ -0.78
TUBB3-202ENST00000553656 STOML3Q8TAV4 291 aa10.18□□□□□ -0.78
TUBB3-202ENST00000553656 MRPL53Q96EL3 112 aaKnown RBP10.18□□□□□ -0.78
TUBB3-202ENST00000553656 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
TUBB3-202ENST00000553656 RCHY1Q96PM5 261 aa10.18□□□□□ -0.78
TUBB3-202ENST00000553656 PPP1R14DQ9NXH3 145 aa10.18□□□□□ -0.78
TUBB3-202ENST00000553656 U3KQK5 164 aa10.18□□□□□ -0.78
TUBB3-202ENST00000553656 NDUFB4O95168 129 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 CNN1P51911 297 aaKnown RBP10.17□□□□□ -0.78
TUBB3-202ENST00000553656 RANP62826 216 aaKnown RBP10.17□□□□□ -0.78
TUBB3-202ENST00000553656 ICAM4Q14773 271 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 FAM74A1Q5RGS3 127 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 SLC51BQ86UW2 128 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 EXOC3-AS1Q8N2X6 119 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 C9orf62Q8N4C0 152 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 TMED6Q8WW62 240 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 PHYHIPLQ96FC7 376 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 CLUHP3Q96NS8 147 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 C1QTNF4Q9BXJ3 329 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 RETNQ9HD89 108 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 TMEM167BQ9NRX6 74 aa10.17□□□□□ -0.78
TUBB3-202ENST00000553656 ZNF705FA8MVS1 300 aaPredicted RBP10.16□□□□□ -0.78
TUBB3-202ENST00000553656 SPRY2O43597 315 aa10.16□□□□□ -0.78
TUBB3-202ENST00000553656 GCHFRP30047 84 aa10.16□□□□□ -0.78
TUBB3-202ENST00000553656 CSN1S1P47710 185 aa10.16□□□□□ -0.78
TUBB3-202ENST00000553656 LYPD1Q8N2G4 141 aa10.16□□□□□ -0.78
TUBB3-202ENST00000553656 Q9H3A6 140 aa10.16□□□□□ -0.78
TUBB3-202ENST00000553656 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
TUBB3-202ENST00000553656 M0R3E3 92 aa10.15□□□□□ -0.78
TUBB3-202ENST00000553656 ZNF705DP0CH99 300 aaPredicted RBP10.15□□□□□ -0.78
TUBB3-202ENST00000553656 ZNF705BP0CI00 300 aaPredicted RBP10.15□□□□□ -0.78
TUBB3-202ENST00000553656 DPPA3Q6W0C5 159 aa10.15□□□□□ -0.78
TUBB3-202ENST00000553656 CMTM2Q8TAZ6 248 aa10.15□□□□□ -0.78
TUBB3-202ENST00000553656 FAM213BQ8TBF2 198 aa10.15□□□□□ -0.78
TUBB3-202ENST00000553656 MAP1LC3B2A6NCE7 125 aa10.14□□□□□ -0.79
TUBB3-202ENST00000553656 ZNF726P1Q15940 193 aa10.14□□□□□ -0.79
TUBB3-202ENST00000553656 RNF183Q96D59 192 aa10.14□□□□□ -0.79
TUBB3-202ENST00000553656 MAP1LC3BQ9GZQ8 125 aa10.14□□□□□ -0.79
TUBB3-202ENST00000553656 OTORQ9NRC9 128 aa10.14□□□□□ -0.79
TUBB3-202ENST00000553656 XCL2Q9UBD3 114 aa10.14□□□□□ -0.79
TUBB3-202ENST00000553656 AGRNO00468 2067 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 BOLA2-SMG1P6H3BVE0 249 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 AMBPP02760 352 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 PRB4P10163 310 aaPredicted RBP10.13□□□□□ -0.79
TUBB3-202ENST00000553656 RAB5CP51148 216 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 NKX2-5P52952 324 aaPredicted RBP10.13□□□□□ -0.79
TUBB3-202ENST00000553656 FXYD7P58549 80 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 SSX7Q7RTT5 188 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 RXFP4Q8TDU9 374 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 OVOL2Q9BRP0 275 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 SLC35B3Q9H1N7 401 aa10.13□□□□□ -0.79
TUBB3-202ENST00000553656 DNAH9Q9NYC9 4486 aa10.12□□□□□ -0.79
TUBB3-202ENST00000553656 PGPA6NDG6 321 aa10.12□□□□□ -0.79
TUBB3-202ENST00000553656 A8MTW9 85 aa10.12□□□□□ -0.79
TUBB3-202ENST00000553656 TSPOP30536 169 aa10.12□□□□□ -0.79
TUBB3-202ENST00000553656 FHITP49789 147 aa10.12□□□□□ -0.79
TUBB3-202ENST00000553656 FGF8P55075 233 aaPredicted RBP10.12□□□□□ -0.79
TUBB3-202ENST00000553656 SPINK13Q1W4C9 94 aa10.12□□□□□ -0.79
TUBB3-202ENST00000553656 IGKV2-40A0A087WW87 121 aaPredicted RBP10.11□□□□□ -0.79
TUBB3-202ENST00000553656 NPIPB6E9PJ23 425 aa10.11□□□□□ -0.79
TUBB3-202ENST00000553656 IGKV2D-40P01614 121 aaPredicted RBP10.11□□□□□ -0.79
TUBB3-202ENST00000553656 GIG44P09565 113 aaPredicted RBP10.11□□□□□ -0.79
TUBB3-202ENST00000553656 AMTNQ6UX39 209 aa10.11□□□□□ -0.79
TUBB3-202ENST00000553656 OR11H2Q8NH07 326 aa10.11□□□□□ -0.79
TUBB3-202ENST00000553656 SFT2D1Q8WV19 159 aa10.11□□□□□ -0.79
TUBB3-202ENST00000553656 RARRES2Q99969 163 aa10.11□□□□□ -0.79
TUBB3-202ENST00000553656 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
TUBB3-202ENST00000553656 GOLT1BQ9Y3E0 138 aa10.11□□□□□ -0.79
TUBB3-202ENST00000553656 TEX46H3BTG2 121 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 M0R2Z0 102 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 INSP01308 110 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 SLC25A5P05141 298 aaKnown RBP10.1□□□□□ -0.79
TUBB3-202ENST00000553656 H2AFB1P0C5Y9 115 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 LEPP41159 167 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 TMEM78Q5T7P6 136 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 SUN5Q8TC36 379 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 LINC00477Q96M19 166 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
TUBB3-202ENST00000553656 IGHV3OR16-12A0A075B7B8 117 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 A0A1W2PRE2 83 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 CDKN1BP46527 198 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 SULT1A2P50226 295 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 UBE2G2P60604 165 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 ARL6IP6Q8N6S5 226 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 C5orf17Q8NAS9 161 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 MBD3L1Q8WWY6 194 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 IGF2BP2-AS1Q96M15 143 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 ODF3Q96PU9 254 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 TMPRSS5Q9H3S3 457 aa10.09□□□□□ -0.79
TUBB3-202ENST00000553656 A0A1B0GV50 99 aa10.08□□□□□ -0.8
TUBB3-202ENST00000553656 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
TUBB3-202ENST00000553656 DIRC3C9JPN6 131 aa10.08□□□□□ -0.8
TUBB3-202ENST00000553656 K7EQM0 130 aa10.08□□□□□ -0.8
TUBB3-202ENST00000553656 SUMO1P63165 101 aaKnown RBP10.08□□□□□ -0.8
TUBB3-202ENST00000553656 ERCC8Q13216 396 aa10.08□□□□□ -0.8
TUBB3-202ENST00000553656 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
TUBB3-202ENST00000553656 CSNK1G2-AS1Q8NCQ2 148 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms