RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 UBALD1Q8TB05 177 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 LSM10Q969L4 123 aaKnown RBP2.39□□□□□ -2.03
TDP1-207ENST00000553617 OSTCQ9NRP0 149 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 KLK5Q9Y337 293 aaPredicted RBP2.39□□□□□ -2.03
TDP1-207ENST00000553617 PARP14Q460N5 1801 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 PLEKHH2Q8IVE3 1493 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 LOC107986453A0A1B0GWG9 222 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 IGLC7A0M8Q6 106 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 GRIFINA4D1Z8 144 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 C19orf84I3L1E1 186 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 LEPROTO15243 131 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 UBL3O95164 117 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 SFT2D2O95562 160 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 CD3DP04234 171 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 IGKV1-16P04430 117 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 GYPBP06028 91 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 NPC2P61916 151 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 RPL18Q07020 188 aaKnown RBP2.38□□□□□ -2.03
TDP1-207ENST00000553617 ZNF678Q5SXM1 525 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 Q6ZS92 163 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 SPATA12Q7Z6I5 190 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 LINC01560Q8TB33 94 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 ZNF431Q8TF32 576 aaPredicted RBP2.38□□□□□ -2.03
TDP1-207ENST00000553617 ITLN2Q8WWU7 325 aaPredicted RBP2.38□□□□□ -2.03
TDP1-207ENST00000553617 DIRC1Q969H9 104 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 B9D2Q9BPU9 175 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 CHCHD7Q9BUK0 85 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 INO80Q9ULG1 1556 aaPredicted RBP2.38□□□□□ -2.03
TDP1-207ENST00000553617 TMEM131LA2VDJ0 1609 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 SCAF11Q99590 1463 aaKnown RBP2.38□□□□□ -2.03
TDP1-207ENST00000553617 ZFC3H1O60293 1989 aaKnown RBP2.38□□□□□ -2.03
TDP1-207ENST00000553617 SIPA1L1O43166 1804 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 SCN4AP35499 1836 aa2.38□□□□□ -2.03
TDP1-207ENST00000553617 ZMYM4Q5VZL5 1548 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 DLC1Q96QB1 1528 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 DSCAMO60469 2012 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 OBSL1O75147 1896 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 CEP170Q5SW79 1584 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 MYH4Q9Y623 1939 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 HFM1A2PYH4 1435 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 IGHV3-49A0A0A0MS15 119 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 GNGT2O14610 69 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 GYPAP02724 150 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 SLC25A6P12236 298 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 HLA-DMBP28068 263 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 ASIPP42127 132 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 RPL27AP46776 148 aaKnown RBP2.37□□□□□ -2.03
TDP1-207ENST00000553617 CMC4P56277 68 aaPredicted RBP2.37□□□□□ -2.03
TDP1-207ENST00000553617 HIST1H4AP62805 103 aaKnown RBP2.37□□□□□ -2.03
TDP1-207ENST00000553617 MRPS36P82909 103 aaKnown RBP2.37□□□□□ -2.03
TDP1-207ENST00000553617 SPRNQ5BIV9 151 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 MIC13Q5XKP0 118 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 FAM104BQ5XKR9 115 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 ARPINQ7Z6K5 226 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 POP5Q969H6 163 aaKnown RBP2.37□□□□□ -2.03
TDP1-207ENST00000553617 S100A16Q96FQ6 103 aaKnown RBP2.37□□□□□ -2.03
TDP1-207ENST00000553617 PLA2G12AQ9BZM1 189 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 TANC2Q9HCD6 1990 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 PRDM15P57071 1507 aaPredicted RBP2.37□□□□□ -2.03
TDP1-207ENST00000553617 SPHKAPQ2M3C7 1700 aa2.37□□□□□ -2.03
TDP1-207ENST00000553617 MAST2Q6P0Q8 1798 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 THADAQ6YHU6 1953 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 RIMBP3CA6NJZ7 1639 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 RIMBP3BA6NNM3 1639 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 SHROOM2Q13796 1616 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 RIMBP3Q9UFD9 1639 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 TRPM6Q9BX84 2022 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 IGLV3-16A0A075B6K0 115 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 IGHV3-43A0A0B4J1X8 118 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 RBAKDNA6NC62 111 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 A8MWL6 223 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 ZNF736B4DX44 427 aaPredicted RBP2.36□□□□□ -2.03
TDP1-207ENST00000553617 HYPMO75409 117 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 COX7CP15954 63 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 NPPCP23582 126 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 TSPEAR-AS2P59090 65 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 PCBD1P61457 104 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 BLCAPP62952 87 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 CDK5R1Q15078 307 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 HMGN3Q15651 99 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 KISS1Q15726 138 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 ADIRFQ15847 76 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 MRPL51Q4U2R6 128 aaKnown RBP2.36□□□□□ -2.03
TDP1-207ENST00000553617 NOXRED1Q6NXP6 359 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 SOSTDC1Q6X4U4 206 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 MIR17HGQ75NE6 70 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 SH2D6Q7Z4S9 175 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 Q8N2B8 174 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 C3orf56Q8N813 242 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 C10orf105Q8TEF2 133 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 DSCR8Q96T75 97 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 PKMYT1Q99640 499 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 RNF5Q99942 180 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 OR5V1Q9UGF6 321 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 PHLDA3Q9Y5J5 127 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 COL1A1P02452 1464 aaPredicted RBP2.36□□□□□ -2.03
TDP1-207ENST00000553617 PIK3C2AO00443 1686 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 KIF26AQ9ULI4 1882 aaPredicted RBP2.36□□□□□ -2.03
TDP1-207ENST00000553617 MYO18AQ92614 2054 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms