RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 NDUFAF3Q9BU61 184 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 SLC25A2Q9BXI2 301 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 CT45A10P0DMU9 189 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 TCTAP57738 103 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 DAD1P61803 113 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 Q6ZQT7 251 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 EXOC3-AS1Q8N2X6 119 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 BLNKQ8WV28 456 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 SLC50A1Q9BRV3 221 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 PPP1R14DQ9NXH3 145 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 FAT2Q9NYQ8 4349 aa12.87□□□□□ -0.35
SHMT2-206ENST00000553529 CXCL2P19875 107 aa12.86□□□□□ -0.35
SHMT2-206ENST00000553529 RAB31Q13636 194 aa12.86□□□□□ -0.35
SHMT2-206ENST00000553529 FAM167A-AS1Q96KT0 104 aa12.86□□□□□ -0.35
SHMT2-206ENST00000553529 MARVELD1Q9BSK0 173 aa12.86□□□□□ -0.35
SHMT2-206ENST00000553529 SMIM3Q9BZL3 60 aa12.86□□□□□ -0.35
SHMT2-206ENST00000553529 NMES1Q9C002 83 aa12.86□□□□□ -0.35
SHMT2-206ENST00000553529 IGLV2-18A0A075B6J9 118 aa12.85□□□□□ -0.35
SHMT2-206ENST00000553529 CDKN1BP46527 198 aa12.85□□□□□ -0.35
SHMT2-206ENST00000553529 HBG1P69891 147 aa12.85□□□□□ -0.35
SHMT2-206ENST00000553529 HBG2P69892 147 aa12.85□□□□□ -0.35
SHMT2-206ENST00000553529 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
SHMT2-206ENST00000553529 PPP1R1CQ8WVI7 109 aa12.85□□□□□ -0.35
SHMT2-206ENST00000553529 TRBV19A0A075B6N1 114 aa12.84□□□□□ -0.35
SHMT2-206ENST00000553529 E5RGE8 158 aa12.84□□□□□ -0.35
SHMT2-206ENST00000553529 IGKV2-40A0A087WW87 121 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-206ENST00000553529 SSNA1O43805 119 aa12.83□□□□□ -0.36
SHMT2-206ENST00000553529 IGKV2D-40P01614 121 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-206ENST00000553529 OR10J4P0C629 311 aa12.83□□□□□ -0.36
SHMT2-206ENST00000553529 ATP6V1FQ16864 119 aa12.83□□□□□ -0.36
SHMT2-206ENST00000553529 POM121L12Q8N7R1 296 aa12.83□□□□□ -0.36
SHMT2-206ENST00000553529 CHAC2Q8WUX2 184 aa12.83□□□□□ -0.36
SHMT2-206ENST00000553529 PFDN5Q99471 154 aa12.83□□□□□ -0.36
SHMT2-206ENST00000553529 WDR61Q9GZS3 305 aaKnown RBP12.83□□□□□ -0.36
SHMT2-206ENST00000553529 WFDC1Q9HC57 220 aa12.83□□□□□ -0.36
SHMT2-206ENST00000553529 NACAE9PAV3 2078 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 TRAV12-3A0A0B4J271 114 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 NPIPB6E9PJ23 425 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 PRAF2O60831 178 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 PRR9Q5T870 116 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 S100A7AQ86SG5 101 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 OR10J6PQ8NGY7 276 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
SHMT2-206ENST00000553529 ZNF503Q96F45 646 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 NOP10Q9NPE3 64 aaKnown RBP12.82□□□□□ -0.36
SHMT2-206ENST00000553529 MBD2Q9UBB5 411 aa12.82□□□□□ -0.36
SHMT2-206ENST00000553529 HECTD4Q9Y4D8 3996 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 MPC2O95563 127 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 TAS2R60P59551 318 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 CD300CQ08708 224 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 BTN1A1Q13410 526 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 OXA1LQ15070 435 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 FAM122CQ6P4D5 195 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 PHYHIPLQ96FC7 376 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 TMEM14CQ9P0S9 112 aa12.81□□□□□ -0.36
SHMT2-206ENST00000553529 DNAH17Q9UFH2 4485 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 F5H768 121 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 TSPOP30536 169 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 ICAM4Q14773 271 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 FXYD5Q96DB9 178 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 VGLL1Q99990 258 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 SLC25A31Q9H0C2 315 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 AGPAT4-IT1Q9H0P7 198 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 HSPB11Q9Y547 144 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 ALG5Q9Y673 324 aa12.8□□□□□ -0.36
SHMT2-206ENST00000553529 LYRM9A8MSI8 78 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 RTL8CO15255 209 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 RLN2P04090 185 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 P0DMU3 169 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 HIST1H1EP10412 219 aaKnown RBP12.79□□□□□ -0.36
SHMT2-206ENST00000553529 UBE2DNLQ8IWF7 75 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 C16orf74Q96GX8 76 aa12.79□□□□□ -0.36
SHMT2-206ENST00000553529 TEX48A0A1B0GUV7 120 aa12.78□□□□□ -0.36
SHMT2-206ENST00000553529 GUK1Q16774 197 aa12.78□□□□□ -0.36
SHMT2-206ENST00000553529 Q8TAT8 98 aa12.78□□□□□ -0.36
SHMT2-206ENST00000553529 ATP5SQ99766 215 aa12.78□□□□□ -0.36
SHMT2-206ENST00000553529 TIMM9Q9Y5J7 89 aa12.78□□□□□ -0.36
SHMT2-206ENST00000553529 H7BYZ3 331 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 MPDU1O75352 247 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 HOXA5P20719 270 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 DEFA1P59665 94 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 DEFA3P59666 94 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 TMEM256Q8N2U0 113 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 TMEM263Q8WUH6 116 aaKnown RBP12.77□□□□□ -0.37
SHMT2-206ENST00000553529 FAM19A4Q96LR4 140 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 RNF24Q9Y225 148 aa12.77□□□□□ -0.37
SHMT2-206ENST00000553529 GAGE12BA1L429 117 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 ZNF253O75346 499 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 GAGE7O76087 117 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 NUDT3O95989 172 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 RPL12P30050 165 aaKnown RBP12.76□□□□□ -0.37
SHMT2-206ENST00000553529 Q5BKY6 102 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 FFAR4Q5NUL3 377 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 OR51M1Q9H341 326 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms