RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 M0R2Z0 102 aa11.03□□□□□ -0.64
SHMT2-204ENST00000553324 SLC17A3O00476 420 aa11.03□□□□□ -0.64
SHMT2-204ENST00000553324 GIPP09681 153 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-204ENST00000553324 ZNF266Q14584 549 aa11.03□□□□□ -0.64
SHMT2-204ENST00000553324 TMEM256Q8N2U0 113 aa11.03□□□□□ -0.64
SHMT2-204ENST00000553324 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
SHMT2-204ENST00000553324 AAMDCQ9H7C9 122 aa11.03□□□□□ -0.64
SHMT2-204ENST00000553324 FUT9Q9Y231 359 aa11.03□□□□□ -0.64
SHMT2-204ENST00000553324 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-204ENST00000553324 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.65
SHMT2-204ENST00000553324 TAS2R45P59539 299 aa11.02□□□□□ -0.65
SHMT2-204ENST00000553324 FFAR4Q5NUL3 377 aa11.02□□□□□ -0.65
SHMT2-204ENST00000553324 MIR17HGQ75NE6 70 aa11.02□□□□□ -0.65
SHMT2-204ENST00000553324 FAM167A-AS1Q96KT0 104 aa11.02□□□□□ -0.65
SHMT2-204ENST00000553324 AQP10Q96PS8 301 aa11.02□□□□□ -0.65
SHMT2-204ENST00000553324 PAXXQ9BUH6 204 aa11.02□□□□□ -0.65
SHMT2-204ENST00000553324 DNAH1Q9P2D7 4330 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 LOC102723971A0A1B0GUV8 181 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 PYYP10082 97 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 EMP1P54849 157 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 OXA1LQ15070 435 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 C12orf74Q32Q52 190 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 ACOT6Q3I5F7 207 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-204ENST00000553324 Q6ZTC4 211 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-204ENST00000553324 BLNKQ8WV28 456 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 RNF141Q8WVD5 230 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 C20orf144Q9BQM9 153 aa11.01□□□□□ -0.65
SHMT2-204ENST00000553324 RYR2Q92736 4967 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 TRAV12-2A0A075B6T6 113 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 PRAC2D3DTV9 90 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 NDUFB4O95168 129 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 TAS2R60P59551 318 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 RPP25LQ8N5L8 163 aaKnown RBP11□□□□□ -0.65
SHMT2-204ENST00000553324 LINC00476Q8WZB0 136 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 LINC00477Q96M19 166 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 LINC01587Q99440 93 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 WFDC1Q9HC57 220 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 DKK2Q9UBU2 259 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 CELA1Q9UNI1 258 aa11□□□□□ -0.65
SHMT2-204ENST00000553324 A0A1W2PPV4 95 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 IGLL5B9A064 214 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 OR7C2O60412 319 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 LY6G6CO95867 125 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 M6PRP20645 277 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 LEPP41159 167 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 KHDC3LQ587J8 217 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 BAP18Q8IXM2 172 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 LYPD1Q8N2G4 141 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 NIPSNAP3BQ9BS92 247 aa10.99□□□□□ -0.65
SHMT2-204ENST00000553324 DEFB131BA0A096LNP1 70 aa10.98□□□□□ -0.65
SHMT2-204ENST00000553324 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
SHMT2-204ENST00000553324 H7BYZ3 331 aa10.98□□□□□ -0.65
SHMT2-204ENST00000553324 FAM222AQ5U5X8 452 aa10.98□□□□□ -0.65
SHMT2-204ENST00000553324 LGALS9CQ6DKI2 356 aa10.98□□□□□ -0.65
SHMT2-204ENST00000553324 FXYD5Q96DB9 178 aa10.98□□□□□ -0.65
SHMT2-204ENST00000553324 YTHDF2Q9Y5A9 579 aaKnown RBP10.98□□□□□ -0.65
SHMT2-204ENST00000553324 LYRM9A8MSI8 78 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 ZNF705GA8MUZ8 300 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-204ENST00000553324 M0R3E3 92 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 MBP02144 154 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 OR10J4P0C629 311 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 CT45A10P0DMU9 189 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 CSN1S1P47710 185 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 ICAM4Q14773 271 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 ZNF493Q6ZR52 646 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 EXOC3-AS1Q8N2X6 119 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 OR2T35Q8NGX2 323 aa10.97□□□□□ -0.65
SHMT2-204ENST00000553324 ALMS1Q8TCU4 4167 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 SLC25A5P05141 298 aaKnown RBP10.96□□□□□ -0.65
SHMT2-204ENST00000553324 SERF2P84101 59 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 Q5BKY6 102 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 PQLC2Q6ZP29 291 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 CCDC28AQ8IWP9 274 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 OR10G4Q8NGN3 311 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 OR10G9Q8NGN4 311 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 OR10G7Q8NGN6 311 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 FAM210BQ96KR6 192 aa10.96□□□□□ -0.65
SHMT2-204ENST00000553324 PSMG3Q9BT73 122 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-204ENST00000553324 NMBP08949 121 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 PRB4P10163 310 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-204ENST00000553324 HTN1P15515 57 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
SHMT2-204ENST00000553324 UBE2L3P68036 154 aaKnown RBP10.95□□□□□ -0.66
SHMT2-204ENST00000553324 TMEM78Q5T7P6 136 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 FAM122CQ6P4D5 195 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 C9orf47Q6ZRZ4 202 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 ZNF767PQ75MW2 155 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 OR2G3Q8NGZ4 309 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 RXFP4Q8TDU9 374 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 C16orf74Q96GX8 76 aa10.95□□□□□ -0.66
SHMT2-204ENST00000553324 HYDINQ4G0P3 5121 aa10.94□□□□□ -0.66
SHMT2-204ENST00000553324 IGHV4-4A0A075B6R2 117 aa10.94□□□□□ -0.66
SHMT2-204ENST00000553324 FXYD6-FXYD2A0A087WZ82 144 aa10.94□□□□□ -0.66
SHMT2-204ENST00000553324 BORCS7-ASMTA0A0B4J1R7 106 aa10.94□□□□□ -0.66
SHMT2-204ENST00000553324 DAD1P61803 113 aa10.94□□□□□ -0.66
SHMT2-204ENST00000553324 FAM74A1Q5RGS3 127 aa10.94□□□□□ -0.66
SHMT2-204ENST00000553324 GFI1BQ5VTD9 330 aa10.94□□□□□ -0.66
SHMT2-204ENST00000553324 HSD17B11Q8NBQ5 300 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms