RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 HIST1H1AQ02539 215 aaPredicted RBP8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 PQLC2Q6ZP29 291 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 TCTE3Q8IZS6 198 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 KCNRGQ8N5I3 272 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 OR11H4Q8NGC9 324 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 OR10G4Q8NGN3 311 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 OR10G9Q8NGN4 311 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 OR10G7Q8NGN6 311 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 BLNKQ8WV28 456 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 ZNF503Q96F45 646 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 ST6GAL2Q96JF0 529 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 SLC35B3Q9H1N7 401 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 AAMDCQ9H7C9 122 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 PRELID1Q9Y255 219 aa8.52□□□□□ -1.05
TRAFD1-209ENST00000552896 A0A0J9YWU9 116 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 A0A1W2PPV4 95 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 C3orf84H3BNL1 204 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 OR10J4P0C629 311 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 NBEAP1P0C6P0 100 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 ZNF705DP0CH99 300 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 ZNF705BP0CI00 300 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 MIFP14174 115 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 FAM122CQ6P4D5 195 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 Q8NAQ8 132 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 OR10J6PQ8NGY7 276 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 RNF141Q8WVD5 230 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 PHYHIPLQ96FC7 376 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 ARPC5LQ9BPX5 153 aa8.51□□□□□ -1.05
TRAFD1-209ENST00000552896 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 A0A0D9SG52 128 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 ZNF705FA8MVS1 300 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 BCL2L11O43521 198 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 FXYD7P58549 80 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 ZNF705AQ6ZN79 300 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 LYPD1Q8N2G4 141 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 RPP25LQ8N5L8 163 aaKnown RBP8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 IL17DQ8TAD2 202 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 ODF3Q96PU9 254 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 CYTL1Q9NRR1 136 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 X6R8D5 127 aa8.5□□□□□ -1.05
TRAFD1-209ENST00000552896 KANTRA0A1W2PQU2 76 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 NPIPB6E9PJ23 425 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 M0R2Z0 102 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 M0R3E3 92 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 INSP01308 110 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 ARL14EPLP0DKL9 152 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 SPINK13Q1W4C9 94 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 EXOC3-AS1Q8N2X6 119 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 NEU1Q99519 415 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 GOLT1BQ9Y3E0 138 aa8.49□□□□□ -1.05
TRAFD1-209ENST00000552896 hCG_2014768A0A024R1R8 64 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 IGHV4-28A0A0C4DH34 117 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 ICAM4Q14773 271 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 AKAP14Q86UN6 197 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 BAP18Q8IXM2 172 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 RAB24Q969Q5 203 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 ACTR3CQ9C0K3 210 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 Q9H3A6 140 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 PPP1R14DQ9NXH3 145 aa8.48□□□□□ -1.05
TRAFD1-209ENST00000552896 SMIM9A6NGZ8 99 aa8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 CRXO43186 299 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 C1QBP02746 253 aa8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 TSPOP30536 169 aa8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 CDKN1BP46527 198 aa8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 AKR1C8PQ5T2L2 129 aa8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 CASC10Q5T4H9 136 aa8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 OTORQ9NRC9 128 aa8.47□□□□□ -1.05
TRAFD1-209ENST00000552896 DYNC2H1Q8NCM8 4307 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 CTXND1A0A1B0GTU2 59 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 HMGB3O15347 200 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 PFDN1O60925 122 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 CXorf1O96002 111 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 GCHFRP30047 84 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 LEPP41159 167 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 CSN1S1P47710 185 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 RANP62826 216 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 EIF5AP63241 154 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 C9orf47Q6ZRZ4 202 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 TMUB2Q71RG4 321 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 C1orf158Q8N1D5 194 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 TMEM256Q8N2U0 113 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 SUN5Q8TC36 379 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 C20orf144Q9BQM9 153 aa8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 ZNF471Q9BX82 626 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-209ENST00000552896 TRAV12-2A0A075B6T6 113 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 IGHV3OR16-12A0A075B7B8 117 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 IGKV2-40A0A087WW87 121 aaPredicted RBP8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 TMEM189A5PLL7 270 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 RBAKDNA6NC62 111 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 DEFB4AO15263 64 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 IGKV2D-40P01614 121 aaPredicted RBP8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 SLC25A5P05141 298 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms