RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TRAV5A0A0B4J249 113 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 IGHV4-28A0A0C4DH34 117 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 ZNF705EA8MWA4 302 aaPredicted RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 H0YIZ8 118 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 H3BTX0 84 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 HBE1P02100 147 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 ZNF705DP0CH99 300 aaPredicted RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 ZNF705BP0CI00 300 aaPredicted RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 CXCL2P19875 107 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 EMP1P54849 157 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 NANOS2P60321 138 aaKnown RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 GUK1Q16774 197 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 RGS21Q2M5E4 152 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 CEMP1Q6PRD7 247 aaPredicted RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 OR10J6PQ8NGY7 276 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 PHLDA1Q8WV24 401 aaPredicted RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 TMEM37Q8WXS4 190 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 RPUSD4Q96CM3 377 aaKnown RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 C20orf173Q96LM9 149 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 ATP5SQ99766 215 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 NPCDR1Q9BY65 106 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 WDR61Q9GZS3 305 aaKnown RBP4.29□□□□□ -1.72
CCDC65-204ENST00000552188 SLC35B3Q9H1N7 401 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 AAMDCQ9H7C9 122 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 MBD2Q9UBB5 411 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 HSPB11Q9Y547 144 aa4.29□□□□□ -1.72
CCDC65-204ENST00000552188 TRAV8-2A0A0B4J237 113 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 TMEM189A5PLL7 270 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 SMIM9A6NGZ8 99 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 C11orf94C9JXX5 98 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 INSP01308 110 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 HIST1H1EP10412 219 aaKnown RBP4.28□□□□□ -1.72
CCDC65-204ENST00000552188 CXCL3P19876 107 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 HLA-DMBP28068 263 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 CNN1P51911 297 aaKnown RBP4.28□□□□□ -1.72
CCDC65-204ENST00000552188 FCN2Q15485 313 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 SPINK13Q1W4C9 94 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 RRN3P1Q2M238 152 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 FFAR4Q5NUL3 377 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 Q8NAQ8 132 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 INO80EQ8NBZ0 244 aaPredicted RBP4.28□□□□□ -1.72
CCDC65-204ENST00000552188 OR8A1Q8NGG7 326 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 C2CD4CQ8TF44 421 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 BLNKQ8WV28 456 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 IGF2BP2-AS1Q96M15 143 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 C17orf77Q96MU5 243 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 RNF126Q9BV68 326 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
CCDC65-204ENST00000552188 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 OR51M1Q9H341 326 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 HRH4Q9H3N8 390 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 ZNF331Q9NQX6 463 aaPredicted RBP4.28□□□□□ -1.72
CCDC65-204ENST00000552188 RFNGQ9Y644 331 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 DNAH7Q8WXX0 4024 aa4.28□□□□□ -1.72
CCDC65-204ENST00000552188 LCE6AA0A183 80 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 TEX48A0A1B0GUV7 120 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 LOC102723971A0A1B0GUV8 181 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 A0A1W2PPV4 95 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 PRSS29PA6NIE9 313 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF705FA8MVS1 300 aaPredicted RBP4.27□□□□□ -1.73
CCDC65-204ENST00000552188 IGLL5B9A064 214 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 M0R2Z0 102 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
CCDC65-204ENST00000552188 OR7C2O60412 319 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 LY6G6CO95867 125 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 GIG44P09565 113 aaPredicted RBP4.27□□□□□ -1.73
CCDC65-204ENST00000552188 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 RBMY1A1P0DJD3 496 aaKnown RBP4.27□□□□□ -1.73
CCDC65-204ENST00000552188 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 PYYP10082 97 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 PRB4P10163 310 aaPredicted RBP4.27□□□□□ -1.73
CCDC65-204ENST00000552188 HTN1P15515 57 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 TSPOP30536 169 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 TAS2R45P59539 299 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 RBMY1FQ15415 496 aaKnown RBP4.27□□□□□ -1.73
CCDC65-204ENST00000552188 ACOT6Q3I5F7 207 aaPredicted RBP4.27□□□□□ -1.73
CCDC65-204ENST00000552188 GCSAMLQ5JQS6 135 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 CSNK1G2-AS1Q8NCQ2 148 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 OR11H7Q8NGC8 314 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 LINC01587Q99440 93 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 NEU1Q99519 415 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 PAXXQ9BUH6 204 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 PRELID1Q9Y255 219 aa4.27□□□□□ -1.73
CCDC65-204ENST00000552188 STAB2Q8WWQ8 2551 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 TRAV12-2A0A075B6T6 113 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 FXYD6-FXYD2A0A087WZ82 144 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 TRAV10A0A0B4J240 114 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 F8WDY8 70 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 H3BQ15 152 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 CIDEAO60543 219 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 GIPP09681 153 aaPredicted RBP4.26□□□□□ -1.73
CCDC65-204ENST00000552188 NBEAP1P0C6P0 100 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 IGLC2P0DOY2 106 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 LEPP41159 167 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 CDKN1BP46527 198 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 CSN1S1P47710 185 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF266Q14584 549 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF705AQ6ZN79 300 aaPredicted RBP4.26□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF767PQ75MW2 155 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms