RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, human

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPN3-210	ENST00000552180	FFAR4	Q5NUL3	377 aa		13.92	□□□□□ -0.18
GPN3-210	ENST00000552180	VPS13D	Q5THJ4	4388 aa		13.92	□□□□□ -0.18
GPN3-210	ENST00000552180	BAP18	Q8IXM2	172 aa		13.91	□□□□□ -0.18
GPN3-210	ENST00000552180	FXYD5	Q96DB9	178 aa		13.91	□□□□□ -0.18
GPN3-210	ENST00000552180	MRPL53	Q96EL3	112 aa	Known RBP	13.91	□□□□□ -0.18
GPN3-210	ENST00000552180	ZNF503	Q96F45	646 aa		13.91	□□□□□ -0.18
GPN3-210	ENST00000552180	OR51M1	Q9H341	326 aa		13.91	□□□□□ -0.18
GPN3-210	ENST00000552180	KLK5	Q9Y337	293 aa	Predicted RBP	13.91	□□□□□ -0.18
GPN3-210	ENST00000552180	TRAV12-2	A0A075B6T6	113 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180		G3V3Q6	166 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180		M0R3E3	92 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180	INS	P01308	110 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180	NBEAP1	P0C6P0	100 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180	OR10J6P	Q8NGY7	276 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180	BLNK	Q8WV28	456 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180	TIMM9	Q9Y5J7	89 aa		13.9	□□□□□ -0.18
GPN3-210	ENST00000552180	KMT2A	Q03164	3969 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	TMEM189	A5PLL7	270 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	JTB	O76095	146 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	C12orf74	Q32Q52	190 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180		Q6ZTC4	211 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	EXOC3-AS1	Q8N2X6	119 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	RNF141	Q8WVD5	230 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	PAXX	Q9BUH6	204 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	PRELID1	Q9Y255	219 aa		13.89	□□□□□ -0.19
GPN3-210	ENST00000552180	RNF222	A6NCQ9	220 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	NPIPB6	E9PJ23	425 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	HBE1	P02100	147 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	PRM2	P04554	102 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	CT45A10	P0DMU9	189 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	CDKN1B	P46527	198 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	KIR3DS1	Q14943	382 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	RPP25L	Q8N5L8	163 aa	Known RBP	13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	OR2T35	Q8NGX2	323 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	PPP1R14D	Q9NXH3	145 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	TNFSF18	Q9UNG2	199 aa		13.88	□□□□□ -0.19
GPN3-210	ENST00000552180	C11orf94	C9JXX5	98 aa		13.87	□□□□□ -0.19
GPN3-210	ENST00000552180	OR10J4	P0C629	311 aa		13.87	□□□□□ -0.19
GPN3-210	ENST00000552180	EMP1	P54849	157 aa		13.87	□□□□□ -0.19
GPN3-210	ENST00000552180	RRN3P1	Q2M238	152 aa		13.87	□□□□□ -0.19
GPN3-210	ENST00000552180	TMEM208	Q9BTX3	173 aa		13.87	□□□□□ -0.19
GPN3-210	ENST00000552180	DKK2	Q9UBU2	259 aa		13.87	□□□□□ -0.19
GPN3-210	ENST00000552180	LOC102723971	A0A1B0GUV8	181 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	SPART-AS1	P0CW21	52 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	M6PR	P20645	277 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	ZNF266	Q14584	549 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	ICAM4	Q14773	271 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	ZNF767P	Q75MW2	155 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	LINC00476	Q8WZB0	136 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	ODF3	Q96PU9	254 aa		13.86	□□□□□ -0.19
GPN3-210	ENST00000552180	OR7C2	O60412	319 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	EIF3G	O75821	320 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	AZU1	P20160	251 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	RAB2A	P61019	212 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	ERCC8	Q13216	396 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	TMEM256	Q8N2U0	113 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	OR2G3	Q8NGZ4	309 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	C2CD4C	Q8TF44	421 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	PHYHIPL	Q96FC7	376 aa		13.85	□□□□□ -0.19
GPN3-210	ENST00000552180	FXYD6-FXYD2	A0A087WZ82	144 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	TRAV10	A0A0B4J240	114 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	ATP6V0C	P27449	155 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	TSPO	P30536	169 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	TAS2R45	P59539	299 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	KHDC3L	Q587J8	217 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	FAM222A	Q5U5X8	452 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	HSD17B11	Q8NBQ5	300 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	FAM19A4	Q96LR4	140 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	PSMG3	Q9BT73	122 aa	Predicted RBP	13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	AGPAT4-IT1	Q9H0P7	198 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	AAMDC	Q9H7C9	122 aa		13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.84	□□□□□ -0.19
GPN3-210	ENST00000552180	DNAH6	Q9C0G6	4158 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	PLAC8L1	A1L4L8	177 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	GFI1B	Q5VTD9	330 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	FAM122C	Q6P4D5	195 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	C9orf47	Q6ZRZ4	202 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	LYPD1	Q8N2G4	141 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	LINC00477	Q96M19	166 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	LINC01587	Q99440	93 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	C20orf144	Q9BQM9	153 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	PLA2G2E	Q9NZK7	142 aa		13.83	□□□□□ -0.2
GPN3-210	ENST00000552180	TAS2R60	P59551	318 aa		13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	RAN	P62826	216 aa	Known RBP	13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	UBE2L3	P68036	154 aa	Known RBP	13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	RPL7L1	Q6DKI1	246 aa	Known RBP	13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	OR10G4	Q8NGN3	311 aa		13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	OR10G9	Q8NGN4	311 aa		13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	OR10G7	Q8NGN6	311 aa		13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	APLN	Q9ULZ1	77 aa		13.82	□□□□□ -0.2
GPN3-210	ENST00000552180	TEX48	A0A1B0GUV7	120 aa		13.81	□□□□□ -0.2
GPN3-210	ENST00000552180		A0A1W2PPV4	95 aa		13.81	□□□□□ -0.2
GPN3-210	ENST00000552180	IGLL5	B9A064	214 aa		13.81	□□□□□ -0.2
GPN3-210	ENST00000552180	LEP	P41159	167 aa		13.81	□□□□□ -0.2
GPN3-210	ENST00000552180	TCTA	P57738	103 aa		13.81	□□□□□ -0.2
GPN3-210	ENST00000552180	SERF2	P84101	59 aa		13.81	□□□□□ -0.2
GPN3-210	ENST00000552180	VGLL1	Q99990	258 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms