RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NXPH4O95158 308 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 SNRPCP09234 159 aaKnown RBP9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 SLC38A11Q08AI6 406 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 TOMM5Q8N4H5 51 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 MCFD2Q8NI22 146 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 DYNC2LI1Q8TCX1 351 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 SMIM8Q96KF7 97 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 C18orf15Q96N68 181 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 ICOSQ9Y6W8 199 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 TRAV9-2A0A087WT02 112 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 TRGV1A0A0A0MS02 117 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 SLC17A3O00476 420 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 COX7A2P2O60397 106 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 CT45A10P0DMU9 189 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 C4orf46Q504U0 113 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 OR10P1Q8NGE3 313 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 ZNF431Q8TF32 576 aaPredicted RBP9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 RAB2BQ8WUD1 216 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 SOSTQ9BQB4 213 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 FUT9Q9Y231 359 aa9.7□□□□□ -0.86
CHMP1A-210ENST00000551981 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 H3BTX0 84 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 PAX4O43316 350 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 SLC25A5P05141 298 aaKnown RBP9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 METTL15P1P0C7V9 234 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 TNFSF8P32971 234 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 UBE2MP61081 183 aaKnown RBP9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 ICAM4Q14773 271 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 ZBTB8BQ8NAP8 495 aaPredicted RBP9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 DEDD2Q8WXF8 326 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 MRPS26Q9BYN8 205 aaKnown RBP9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
CHMP1A-210ENST00000551981 A0A087WTM6 91 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 LINC00854A0A1B0GVQ3 168 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 CCNKO75909 580 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 IGLC2P0DOY2 106 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 GUK1Q16774 197 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 PYDC2Q56P42 97 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 C10orf113Q5VZT2 155 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 TRIM63Q969Q1 353 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 BCL7BQ9BQE9 202 aa9.68□□□□□ -0.86
CHMP1A-210ENST00000551981 C7orf71A4D174 169 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 AGPAT2O15120 278 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 ZNF324O75467 553 aaPredicted RBP9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 DNAH10OSP0CZ25 163 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 SLAQ13239 276 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 OPCMLQ14982 345 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 EIF4E3Q8N5X7 224 aaKnown RBP9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 SAT2Q96F10 170 aaPredicted RBP9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 GGACTQ9BVM4 153 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 LY96Q9Y6Y9 160 aa9.67□□□□□ -0.86
CHMP1A-210ENST00000551981 H3BQ15 152 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 K7EP13 123 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 SPINK4O60575 86 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 TSC22D2O75157 780 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 GCSHP23434 173 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 TMBIM6P55061 237 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 TAS2R30P59541 319 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 ANXA2RQ3ZCQ2 193 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 TMEM37Q8WXS4 190 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 ST6GAL2Q96JF0 529 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 SLIRPQ9GZT3 109 aaKnown RBP9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 PRO0255Q9UI72 69 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 TNFRSF18Q9Y5U5 241 aa9.66□□□□□ -0.86
CHMP1A-210ENST00000551981 C9orf170A2RU37 121 aa9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 NOL3O60936 208 aaKnown RBP9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 SCGB1D2O95969 90 aa9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 RAB31Q13636 194 aa9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 Q6ZRG5 221 aa9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 MRPL53Q96EL3 112 aaKnown RBP9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
CHMP1A-210ENST00000551981 KLLNB2CW77 178 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 ZNF253O75346 499 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 OR4E1P0C645 316 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 TCL1AP56279 114 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 IBA57Q5T440 356 aaKnown RBP9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 MORN5Q5VZ52 161 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 Q6ZSN1 163 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 MGST2Q99735 147 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 DNAJC4Q9NNZ3 241 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 MDFICQ9P1T7 246 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 HHLA3Q9XRX5 114 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
CHMP1A-210ENST00000551981 MPDU1O75352 247 aa9.63□□□□□ -0.87
CHMP1A-210ENST00000551981 IGHV3-53P01767 116 aa9.63□□□□□ -0.87
CHMP1A-210ENST00000551981 EVI2AP22794 236 aa9.63□□□□□ -0.87
CHMP1A-210ENST00000551981 RNASE4P34096 147 aaKnown RBP9.63□□□□□ -0.87
CHMP1A-210ENST00000551981 CAMLGP49069 296 aa9.63□□□□□ -0.87
CHMP1A-210ENST00000551981 CRYBA4P53673 196 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms