RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 TMEM41BQ5BJD5 291 aa11.88□□□□□ -0.51
GCN1-209ENST00000551920 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
GCN1-209ENST00000551920 OR11H2Q8NH07 326 aa11.88□□□□□ -0.51
GCN1-209ENST00000551920 GNPNAT1Q96EK6 184 aaPredicted RBP11.88□□□□□ -0.51
GCN1-209ENST00000551920 RARRES2Q99969 163 aa11.88□□□□□ -0.51
GCN1-209ENST00000551920 X6R8D5 127 aa11.88□□□□□ -0.51
GCN1-209ENST00000551920 JTBO76095 146 aa11.87□□□□□ -0.51
GCN1-209ENST00000551920 DUSP14O95147 198 aaKnown RBP11.87□□□□□ -0.51
GCN1-209ENST00000551920 TAS2R45P59539 299 aa11.87□□□□□ -0.51
GCN1-209ENST00000551920 SERF2P84101 59 aa11.87□□□□□ -0.51
GCN1-209ENST00000551920 ARPC5LQ9BPX5 153 aa11.87□□□□□ -0.51
GCN1-209ENST00000551920 ZNF705EA8MWA4 302 aaPredicted RBP11.86□□□□□ -0.51
GCN1-209ENST00000551920 M0R2Z0 102 aa11.86□□□□□ -0.51
GCN1-209ENST00000551920 BCL2L11O43521 198 aa11.86□□□□□ -0.51
GCN1-209ENST00000551920 CDC34P49427 236 aaPredicted RBP11.86□□□□□ -0.51
GCN1-209ENST00000551920 SPINK13Q1W4C9 94 aa11.86□□□□□ -0.51
GCN1-209ENST00000551920 Q8NAQ8 132 aa11.86□□□□□ -0.51
GCN1-209ENST00000551920 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
GCN1-209ENST00000551920 MRPL53Q96EL3 112 aaKnown RBP11.86□□□□□ -0.51
GCN1-209ENST00000551920 C1QTNF4Q9BXJ3 329 aa11.86□□□□□ -0.51
GCN1-209ENST00000551920 A0A1W2PPV4 95 aa11.85□□□□□ -0.51
GCN1-209ENST00000551920 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
GCN1-209ENST00000551920 CRXO43186 299 aaPredicted RBP11.85□□□□□ -0.51
GCN1-209ENST00000551920 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
GCN1-209ENST00000551920 ICAM4Q14773 271 aa11.85□□□□□ -0.51
GCN1-209ENST00000551920 ZNF726P1Q15940 193 aa11.85□□□□□ -0.51
GCN1-209ENST00000551920 ZNF705AQ6ZN79 300 aaPredicted RBP11.85□□□□□ -0.51
GCN1-209ENST00000551920 AKAP14Q86UN6 197 aa11.85□□□□□ -0.51
GCN1-209ENST00000551920 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
GCN1-209ENST00000551920 A0A0D9SG52 128 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 NPIPB6E9PJ23 425 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 DEFB4AO15263 64 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 MBP02144 154 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 BAP18Q8IXM2 172 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 CSMD3Q7Z407 3707 aa11.84□□□□□ -0.51
GCN1-209ENST00000551920 IGKV2-40A0A087WW87 121 aaPredicted RBP11.83□□□□□ -0.52
GCN1-209ENST00000551920 IGHV4-28A0A0C4DH34 117 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 IGKV2D-40P01614 121 aaPredicted RBP11.83□□□□□ -0.52
GCN1-209ENST00000551920 C1QBP02746 253 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 RBMY1A1P0DJD3 496 aaKnown RBP11.83□□□□□ -0.52
GCN1-209ENST00000551920 RBMY1CP0DJD4 496 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
GCN1-209ENST00000551920 KIR3DS1Q14943 382 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 RBMY1FQ15415 496 aaKnown RBP11.83□□□□□ -0.52
GCN1-209ENST00000551920 TMUB2Q71RG4 321 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 Q9H3A6 140 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 C11orf68Q9H3H3 251 aaKnown RBP11.83□□□□□ -0.52
GCN1-209ENST00000551920 AAMDCQ9H7C9 122 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 PRELID1Q9Y255 219 aa11.83□□□□□ -0.52
GCN1-209ENST00000551920 STARD9Q9P2P6 4700 aa11.82□□□□□ -0.52
GCN1-209ENST00000551920 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
GCN1-209ENST00000551920 KANTRA0A1W2PQU2 76 aa11.82□□□□□ -0.52
GCN1-209ENST00000551920 CT45A10P0DMU9 189 aa11.82□□□□□ -0.52
GCN1-209ENST00000551920 ERCC8Q13216 396 aa11.82□□□□□ -0.52
GCN1-209ENST00000551920 LGALSLQ3ZCW2 172 aaPredicted RBP11.82□□□□□ -0.52
GCN1-209ENST00000551920 OR10J6PQ8NGY7 276 aa11.82□□□□□ -0.52
GCN1-209ENST00000551920 IGF2BP2-AS1Q96M15 143 aa11.82□□□□□ -0.52
GCN1-209ENST00000551920 ZNF471Q9BX82 626 aaPredicted RBP11.82□□□□□ -0.52
GCN1-209ENST00000551920 IGHV3OR16-12A0A075B7B8 117 aa11.81□□□□□ -0.52
GCN1-209ENST00000551920 GCHFRP30047 84 aa11.81□□□□□ -0.52
GCN1-209ENST00000551920 ACTR3CQ9C0K3 210 aaPredicted RBP11.81□□□□□ -0.52
GCN1-209ENST00000551920 PFDN1O60925 122 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 AMBPP02760 352 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 MIFP14174 115 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 FHITP49789 147 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 AKR1C8PQ5T2L2 129 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 LYPD1Q8N2G4 141 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 IL17DQ8TAD2 202 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 SUN5Q8TC36 379 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 VGLL1Q99990 258 aa11.8□□□□□ -0.52
GCN1-209ENST00000551920 CTXND1A0A1B0GTU2 59 aa11.79□□□□□ -0.52
GCN1-209ENST00000551920 INSP01308 110 aa11.79□□□□□ -0.52
GCN1-209ENST00000551920 CASC10Q5T4H9 136 aa11.79□□□□□ -0.52
GCN1-209ENST00000551920 STOML3Q8TAV4 291 aa11.79□□□□□ -0.52
GCN1-209ENST00000551920 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
GCN1-209ENST00000551920 AGPAT4-IT1Q9H0P7 198 aa11.79□□□□□ -0.52
GCN1-209ENST00000551920 OTORQ9NRC9 128 aa11.79□□□□□ -0.52
GCN1-209ENST00000551920 C3orf84H3BNL1 204 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 CXorf1O96002 111 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 PRM2P04554 102 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 CDKN1BP46527 198 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 GFI1BQ5VTD9 330 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 C9orf47Q6ZRZ4 202 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 C9orf62Q8N4C0 152 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 Q8TAT8 98 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 TMED6Q8WW62 240 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 FAM19A4Q96LR4 140 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 HYLS1Q96M11 299 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 NEU1Q99519 415 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 PPP1R14DQ9NXH3 145 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 GOLT1BQ9Y3E0 138 aa11.78□□□□□ -0.52
GCN1-209ENST00000551920 GGTLC3B5MD39 225 aa11.77□□□□□ -0.53
GCN1-209ENST00000551920 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms