RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 HIST1H1AQ02539 215 aaPredicted RBP7.75□□□□□ -1.17
PTCH1-225ENST00000551845 KHDC3LQ587J8 217 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 FAM122CQ6P4D5 195 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 KCNRGQ8N5I3 272 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 OR11H4Q8NGC9 324 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 IL17DQ8TAD2 202 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 ARPC5LQ9BPX5 153 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 PRELID1Q9Y255 219 aa7.75□□□□□ -1.17
PTCH1-225ENST00000551845 DNAH7Q8WXX0 4024 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 SLC17A3O00476 420 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 NDUFB4O95168 129 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 OR10J4P0C629 311 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 ZNF705DP0CH99 300 aaPredicted RBP7.74□□□□□ -1.17
PTCH1-225ENST00000551845 ZNF705BP0CI00 300 aaPredicted RBP7.74□□□□□ -1.17
PTCH1-225ENST00000551845 C4BPBP20851 252 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 FXYD7P58549 80 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 RAB2AP61019 212 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 ZNF345Q14585 488 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 PQLC2Q6ZP29 291 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 CSNK1G2-AS1Q8NCQ2 148 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 OR10J6PQ8NGY7 276 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 ST6GAL2Q96JF0 529 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 ACTR3CQ9C0K3 210 aaPredicted RBP7.74□□□□□ -1.17
PTCH1-225ENST00000551845 SLC35B3Q9H1N7 401 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 CYTL1Q9NRR1 136 aa7.74□□□□□ -1.17
PTCH1-225ENST00000551845 KANTRA0A1W2PQU2 76 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 AMBPP02760 352 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 CDC34P49427 236 aaPredicted RBP7.73□□□□□ -1.17
PTCH1-225ENST00000551845 RANP62826 216 aaKnown RBP7.73□□□□□ -1.17
PTCH1-225ENST00000551845 EIF5AP63241 154 aaKnown RBP7.73□□□□□ -1.17
PTCH1-225ENST00000551845 TCTE3Q8IZS6 198 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 LYPD1Q8N2G4 141 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 EXOC3-AS1Q8N2X6 119 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 RPP25LQ8N5L8 163 aaKnown RBP7.73□□□□□ -1.17
PTCH1-225ENST00000551845 FXYD5Q96DB9 178 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 MRPL53Q96EL3 112 aaKnown RBP7.73□□□□□ -1.17
PTCH1-225ENST00000551845 LYSTQ99698 3801 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 SH3BGRL3Q9H299 93 aa7.73□□□□□ -1.17
PTCH1-225ENST00000551845 hCG_2014768A0A024R1R8 64 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 A0A0J9YWU9 116 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 A8MTW9 85 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 ZNF705EA8MWA4 302 aaPredicted RBP7.72□□□□□ -1.17
PTCH1-225ENST00000551845 MIFP14174 115 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 CSN1S1P47710 185 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 UBE2L3P68036 154 aaKnown RBP7.72□□□□□ -1.17
PTCH1-225ENST00000551845 ICAM4Q14773 271 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 AKR1C8PQ5T2L2 129 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 AMTNQ6UX39 209 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 RAB24Q969Q5 203 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 ZNF503Q96F45 646 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 GOLT1BQ9Y3E0 138 aa7.72□□□□□ -1.17
PTCH1-225ENST00000551845 HUWE1Q7Z6Z7 4374 aaKnown RBP7.72□□□□□ -1.17
PTCH1-225ENST00000551845 IGHV3OR16-12A0A075B7B8 117 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 PRAC2D3DTV9 90 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 M0R3E3 92 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 HMGB3O15347 200 aaKnown RBP7.71□□□□□ -1.18
PTCH1-225ENST00000551845 PFDN1O60925 122 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 EIF3GO75821 320 aaKnown RBP eCLIP7.71□□□□□ -1.18
PTCH1-225ENST00000551845 STAG3L2P0CL84 134 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 STAG3L3P0CL85 134 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 PRB4P10163 310 aaPredicted RBP7.71□□□□□ -1.18
PTCH1-225ENST00000551845 TSPOP30536 169 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 SPINK13Q1W4C9 94 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 FAM74A1Q5RGS3 127 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 TMUB2Q71RG4 321 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 AKAP14Q86UN6 197 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 RXFP4Q8TDU9 374 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 HYLS1Q96M11 299 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 IGF2BP2-AS1Q96M15 143 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 LINC00477Q96M19 166 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 TMEM208Q9BTX3 173 aa7.71□□□□□ -1.18
PTCH1-225ENST00000551845 ZNF471Q9BX82 626 aaPredicted RBP7.71□□□□□ -1.18
PTCH1-225ENST00000551845 PGPA6NDG6 321 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 BOLA2-SMG1P6H3BVE0 249 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 BCL2L11O43521 198 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 CXorf1O96002 111 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 SEC11BP0C7V7 166 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 CDKN1BP46527 198 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 ZNF705AQ6ZN79 300 aaPredicted RBP7.7□□□□□ -1.18
PTCH1-225ENST00000551845 CMTM2Q8TAZ6 248 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 NEU1Q99519 415 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 Q9H3A6 140 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 X6R8D5 127 aa7.7□□□□□ -1.18
PTCH1-225ENST00000551845 NPIPB6E9PJ23 425 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 M0R2Z0 102 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 DEFB4AO15263 64 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 C1QBP02746 253 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 ARL14EPLP0DKL9 152 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 LGALSLQ3ZCW2 172 aaPredicted RBP7.69□□□□□ -1.18
PTCH1-225ENST00000551845 BAP18Q8IXM2 172 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 C1orf158Q8N1D5 194 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 C11orf45Q8TAV5 145 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 PHYHIPLQ96FC7 376 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 LINC01587Q99440 93 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 AGPAT4-IT1Q9H0P7 198 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 OTORQ9NRC9 128 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 TMEM167BQ9NRX6 74 aa7.69□□□□□ -1.18
PTCH1-225ENST00000551845 TRAV12-2A0A075B6T6 113 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms