RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 FHL2Q14192 279 aa10.21□□□□□ -0.77
CACNB3-220ENST00000551716 TDRG1Q3Y452 100 aa10.21□□□□□ -0.77
CACNB3-220ENST00000551716 EIF4E3Q8N5X7 224 aaKnown RBP10.21□□□□□ -0.77
CACNB3-220ENST00000551716 OR51S1Q8NGJ8 323 aa10.21□□□□□ -0.77
CACNB3-220ENST00000551716 PRRT1Q99946 306 aa10.21□□□□□ -0.77
CACNB3-220ENST00000551716 VGLL1Q99990 258 aa10.21□□□□□ -0.77
CACNB3-220ENST00000551716 RCL1Q9Y2P8 373 aaKnown RBP10.21□□□□□ -0.77
CACNB3-220ENST00000551716 K7EQD1 137 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 PITX3O75364 302 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 ORM1P02763 201 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 CT45A10P0DMU9 189 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 PRB4P10163 310 aaPredicted RBP10.2□□□□□ -0.78
CACNB3-220ENST00000551716 TCL1AP56279 114 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 IBA57Q5T440 356 aaKnown RBP10.2□□□□□ -0.78
CACNB3-220ENST00000551716 TXNDC17Q9BRA2 123 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
CACNB3-220ENST00000551716 IBA57-AS1B1ANH7 110 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 PRAC2D3DTV9 90 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 MRPS12O15235 138 aaKnown RBP10.19□□□□□ -0.78
CACNB3-220ENST00000551716 LINC00869P0C866 280 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 SLC25A6P12236 298 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 ASAH1Q13510 395 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 PXDC1Q5TGL8 231 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 TEPPQ6URK8 271 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 IQCF2Q8IXL9 164 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 PRR13Q9NZ81 148 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 KLF12Q9Y4X4 402 aa10.19□□□□□ -0.78
CACNB3-220ENST00000551716 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 DUXBA0A1W2PPF3 345 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 C7orf71A4D174 169 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 E5RGE8 158 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 MRPS10P82664 201 aaKnown RBP10.18□□□□□ -0.78
CACNB3-220ENST00000551716 BPIFA4PQ86YQ2 179 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 EXTL2Q9UBQ6 330 aa10.18□□□□□ -0.78
CACNB3-220ENST00000551716 SMCO3A2RU48 225 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 RS1O15537 224 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 SYNGR2O43760 224 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 MPDU1O75352 247 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 ACOT6Q3I5F7 207 aaPredicted RBP10.17□□□□□ -0.78
CACNB3-220ENST00000551716 FAAP20Q6NZ36 180 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 AP3S1Q92572 193 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 YIPF6Q96EC8 236 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 ARL6Q9H0F7 186 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 ARV1Q9H2C2 271 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 STRAPQ9Y3F4 350 aaKnown RBP10.17□□□□□ -0.78
CACNB3-220ENST00000551716 FAT3Q8TDW7 4589 aa10.17□□□□□ -0.78
CACNB3-220ENST00000551716 LINC00854A0A1B0GVQ3 168 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 WRBO00258 174 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 AKAIN1P0CW23 69 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 GYPEP15421 78 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 TIRAPP58753 221 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 KRTAP10-4P60372 401 aaPredicted RBP10.16□□□□□ -0.78
CACNB3-220ENST00000551716 LINC01556Q5JQF7 62 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 SPANXN5Q5MJ07 72 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 MORN5Q5VZ52 161 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 SCXQ7RTU7 201 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 SCP2D1Q9UJQ7 156 aa10.16□□□□□ -0.78
CACNB3-220ENST00000551716 C9JCJ5 164 aa10.15□□□□□ -0.78
CACNB3-220ENST00000551716 ANKRD65E5RJM6 399 aa10.15□□□□□ -0.78
CACNB3-220ENST00000551716 GUK1Q16774 197 aa10.15□□□□□ -0.78
CACNB3-220ENST00000551716 PATE2Q6UY27 113 aa10.15□□□□□ -0.78
CACNB3-220ENST00000551716 LINC00305Q7Z4B0 112 aa10.15□□□□□ -0.78
CACNB3-220ENST00000551716 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
CACNB3-220ENST00000551716 VCX3AQ9NNX9 186 aa10.15□□□□□ -0.78
CACNB3-220ENST00000551716 MRPL16Q9NX20 251 aaKnown RBP10.15□□□□□ -0.78
CACNB3-220ENST00000551716 KLLNB2CW77 178 aa10.14□□□□□ -0.79
CACNB3-220ENST00000551716 K7EPK0 472 aa10.14□□□□□ -0.79
CACNB3-220ENST00000551716 TNFSF8P32971 234 aa10.14□□□□□ -0.79
CACNB3-220ENST00000551716 CLVS1Q8IUQ0 354 aaPredicted RBP10.14□□□□□ -0.79
CACNB3-220ENST00000551716 LINC00477Q96M19 166 aa10.14□□□□□ -0.79
CACNB3-220ENST00000551716 Q9HAA7 133 aa10.14□□□□□ -0.79
CACNB3-220ENST00000551716 NPVFQ9HCQ7 196 aa10.14□□□□□ -0.79
CACNB3-220ENST00000551716 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
CACNB3-220ENST00000551716 RGS13O14921 159 aa10.13□□□□□ -0.79
CACNB3-220ENST00000551716 NMBP08949 121 aa10.13□□□□□ -0.79
CACNB3-220ENST00000551716 RNASE4P34096 147 aaKnown RBP10.13□□□□□ -0.79
CACNB3-220ENST00000551716 POLR2GP62487 172 aaKnown RBP eCLIP10.13□□□□□ -0.79
CACNB3-220ENST00000551716 SAT2Q96F10 170 aaPredicted RBP10.13□□□□□ -0.79
CACNB3-220ENST00000551716 ARPC5LQ9BPX5 153 aa10.13□□□□□ -0.79
CACNB3-220ENST00000551716 SLC25A31Q9H0C2 315 aa10.13□□□□□ -0.79
CACNB3-220ENST00000551716 SLC17A3O00476 420 aa10.12□□□□□ -0.79
CACNB3-220ENST00000551716 GPX1P07203 203 aa10.12□□□□□ -0.79
CACNB3-220ENST00000551716 SNRPCP09234 159 aaKnown RBP10.12□□□□□ -0.79
CACNB3-220ENST00000551716 NCS1P62166 190 aa10.12□□□□□ -0.79
CACNB3-220ENST00000551716 CD300CQ08708 224 aa10.12□□□□□ -0.79
CACNB3-220ENST00000551716 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
CACNB3-220ENST00000551716 MRPL53Q96EL3 112 aaKnown RBP10.12□□□□□ -0.79
CACNB3-220ENST00000551716 FNDC10F2Z333 226 aa10.11□□□□□ -0.79
CACNB3-220ENST00000551716 GOSR2O14653 212 aa10.11□□□□□ -0.79
CACNB3-220ENST00000551716 IGLC2P0DOY2 106 aa10.11□□□□□ -0.79
CACNB3-220ENST00000551716 PPT1P50897 306 aa10.11□□□□□ -0.79
CACNB3-220ENST00000551716 LAGE3Q14657 143 aa10.11□□□□□ -0.79
CACNB3-220ENST00000551716 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
CACNB3-220ENST00000551716 RNF213Q63HN8 5207 aa10.1□□□□□ -0.79
CACNB3-220ENST00000551716 IGHV1OR15-1A0A075B7D0 117 aa10.1□□□□□ -0.79
CACNB3-220ENST00000551716 H3BP45 60 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms