RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 APLNQ9ULZ1 77 aa13.59□□□□□ -0.23
DDX54-208ENST00000551344 DEFB131BA0A096LNP1 70 aa13.58□□□□□ -0.24
DDX54-208ENST00000551344 CDKN1BP46527 198 aa13.58□□□□□ -0.24
DDX54-208ENST00000551344 ZNF767PQ75MW2 155 aa13.58□□□□□ -0.24
DDX54-208ENST00000551344 BAP18Q8IXM2 172 aa13.58□□□□□ -0.24
DDX54-208ENST00000551344 TMEM256Q8N2U0 113 aa13.58□□□□□ -0.24
DDX54-208ENST00000551344 ALMS1Q8TCU4 4167 aa13.58□□□□□ -0.24
DDX54-208ENST00000551344 TRAV12-2A0A075B6T6 113 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 PRAC2D3DTV9 90 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 IFNA5P01569 189 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 TSPOP30536 169 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 OXA1LQ15070 435 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 FAM222AQ5U5X8 452 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 MRPL53Q96EL3 112 aaKnown RBP13.57□□□□□ -0.24
DDX54-208ENST00000551344 NIPSNAP3BQ9BS92 247 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 MRPL32Q9BYC8 188 aaKnown RBP13.57□□□□□ -0.24
DDX54-208ENST00000551344 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 YTHDF2Q9Y5A9 579 aaKnown RBP13.57□□□□□ -0.24
DDX54-208ENST00000551344 TIMM9Q9Y5J7 89 aa13.57□□□□□ -0.24
DDX54-208ENST00000551344 ZNF705GA8MUZ8 300 aaPredicted RBP13.56□□□□□ -0.24
DDX54-208ENST00000551344 PRB4P10163 310 aaPredicted RBP13.56□□□□□ -0.24
DDX54-208ENST00000551344 RPP25LQ8N5L8 163 aaKnown RBP13.56□□□□□ -0.24
DDX54-208ENST00000551344 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
DDX54-208ENST00000551344 LINC01587Q99440 93 aa13.56□□□□□ -0.24
DDX54-208ENST00000551344 SLC25A2Q9BXI2 301 aa13.56□□□□□ -0.24
DDX54-208ENST00000551344 MED28Q9H204 178 aa13.56□□□□□ -0.24
DDX54-208ENST00000551344 IGHV4-4A0A075B6R2 117 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 NDUFB4O95168 129 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 PYYP10082 97 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 TAS2R60P59551 318 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 MIR17HGQ75NE6 70 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 C20orf144Q9BQM9 153 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 PARD6GQ9BYG4 376 aaPredicted RBP13.55□□□□□ -0.24
DDX54-208ENST00000551344 OR51M1Q9H341 326 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 FUT9Q9Y231 359 aa13.55□□□□□ -0.24
DDX54-208ENST00000551344 NBEAP1P0C6P0 100 aa13.54□□□□□ -0.24
DDX54-208ENST00000551344 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
DDX54-208ENST00000551344 ODF3Q96PU9 254 aa13.54□□□□□ -0.24
DDX54-208ENST00000551344 SMIM3Q9BZL3 60 aa13.54□□□□□ -0.24
DDX54-208ENST00000551344 AAMDCQ9H7C9 122 aa13.54□□□□□ -0.24
DDX54-208ENST00000551344 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
DDX54-208ENST00000551344 PRM2P04554 102 aa13.53□□□□□ -0.24
DDX54-208ENST00000551344 FCN2Q15485 313 aa13.53□□□□□ -0.24
DDX54-208ENST00000551344 PAXXQ9BUH6 204 aa13.53□□□□□ -0.24
DDX54-208ENST00000551344 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
DDX54-208ENST00000551344 LYRM9A8MSI8 78 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 H7BYZ3 331 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 M0R3E3 92 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 CT45A10P0DMU9 189 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 FFAR4Q5NUL3 377 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 RNF141Q8WVD5 230 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 ASB13Q8WXK3 278 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 FAM210BQ96KR6 192 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 LINC00477Q96M19 166 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 WFDC1Q9HC57 220 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 HYDINQ4G0P3 5121 aa13.52□□□□□ -0.25
DDX54-208ENST00000551344 AZU1P20160 251 aa13.51□□□□□ -0.25
DDX54-208ENST00000551344 LEPP41159 167 aa13.51□□□□□ -0.25
DDX54-208ENST00000551344 DAD1P61803 113 aa13.51□□□□□ -0.25
DDX54-208ENST00000551344 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
DDX54-208ENST00000551344 EXOC3-AS1Q8N2X6 119 aa13.51□□□□□ -0.25
DDX54-208ENST00000551344 FXYD5Q96DB9 178 aa13.51□□□□□ -0.25
DDX54-208ENST00000551344 NDUFAF3Q9BU61 184 aa13.51□□□□□ -0.25
DDX54-208ENST00000551344 HTN1P15515 57 aa13.5□□□□□ -0.25
DDX54-208ENST00000551344 ICAM4Q14773 271 aa13.5□□□□□ -0.25
DDX54-208ENST00000551344 KIR3DS1Q14943 382 aa13.5□□□□□ -0.25
DDX54-208ENST00000551344 C16orf74Q96GX8 76 aa13.5□□□□□ -0.25
DDX54-208ENST00000551344 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
DDX54-208ENST00000551344 OR7C2O60412 319 aa13.49□□□□□ -0.25
DDX54-208ENST00000551344 OR10J4P0C629 311 aa13.49□□□□□ -0.25
DDX54-208ENST00000551344 TAS2R45P59539 299 aa13.49□□□□□ -0.25
DDX54-208ENST00000551344 GFI1BQ5VTD9 330 aa13.49□□□□□ -0.25
DDX54-208ENST00000551344 GIPP09681 153 aaPredicted RBP13.48□□□□□ -0.25
DDX54-208ENST00000551344 RGS21Q2M5E4 152 aa13.48□□□□□ -0.25
DDX54-208ENST00000551344 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
DDX54-208ENST00000551344 C9orf47Q6ZRZ4 202 aa13.48□□□□□ -0.25
DDX54-208ENST00000551344 LYPD1Q8N2G4 141 aa13.48□□□□□ -0.25
DDX54-208ENST00000551344 AQP10Q96PS8 301 aa13.48□□□□□ -0.25
DDX54-208ENST00000551344 AGPAT4-IT1Q9H0P7 198 aa13.48□□□□□ -0.25
DDX54-208ENST00000551344 SLC25A5P05141 298 aaKnown RBP13.47□□□□□ -0.25
DDX54-208ENST00000551344 M6PRP20645 277 aa13.47□□□□□ -0.25
DDX54-208ENST00000551344 ERCC8Q13216 396 aa13.47□□□□□ -0.25
DDX54-208ENST00000551344 ZNF266Q14584 549 aa13.47□□□□□ -0.25
DDX54-208ENST00000551344 KHDC3LQ587J8 217 aa13.47□□□□□ -0.25
DDX54-208ENST00000551344 CCDC28AQ8IWP9 274 aa13.47□□□□□ -0.25
DDX54-208ENST00000551344 TMEM263Q8WUH6 116 aaKnown RBP13.47□□□□□ -0.25
DDX54-208ENST00000551344 ZNF503Q96F45 646 aa13.47□□□□□ -0.25
DDX54-208ENST00000551344 TIMM8BQ9Y5J9 83 aaPredicted RBP13.47□□□□□ -0.25
DDX54-208ENST00000551344 NMBP08949 121 aa13.46□□□□□ -0.25
DDX54-208ENST00000551344 FAM122CQ6P4D5 195 aa13.46□□□□□ -0.25
DDX54-208ENST00000551344 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
DDX54-208ENST00000551344 FAM19A4Q96LR4 140 aa13.46□□□□□ -0.25
DDX54-208ENST00000551344 KMT2AQ03164 3969 aa13.46□□□□□ -0.25
DDX54-208ENST00000551344 TRAV12-3A0A0B4J271 114 aa13.45□□□□□ -0.26
DDX54-208ENST00000551344 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
DDX54-208ENST00000551344 KLLNB2CW77 178 aa13.45□□□□□ -0.26
DDX54-208ENST00000551344 J3KRW8 73 aa13.45□□□□□ -0.26
DDX54-208ENST00000551344 P0DMU3 169 aa13.45□□□□□ -0.26
DDX54-208ENST00000551344 FAM231AP0DMU4 169 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms