RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	MRPL16	Q9NX20	251 aa	Known RBP	3.7	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CACFD1	Q9UGQ2	172 aa		3.7	□□□□□ -1.82
RACGAP1-223	ENST00000551260	KLF12	Q9Y4X4	402 aa		3.7	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CORT	O00230	105 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CTDSPL	O15194	276 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SFTA3	P0C7M3	94 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	S100G	P29377	79 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SUB1	P53999	127 aa	Known RBP eCLIP	3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	FFAR4	Q5NUL3	377 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	IBA57	Q5T440	356 aa	Known RBP	3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	H2BFWT	Q7Z2G1	175 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SLC35G3	Q8N808	338 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SAMD12	Q8N8I0	201 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	OR8A1	Q8NGG7	326 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	RAB2B	Q8WUD1	216 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ZNF486	Q96H40	463 aa	Predicted RBP	3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ACY3	Q96HD9	319 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ST6GAL2	Q96JF0	529 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SOST	Q9BQB4	213 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	MRPL32	Q9BYC8	188 aa	Known RBP	3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	MGAT4C	Q9UBM8	478 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	MTFP1	Q9UDX5	166 aa		3.69	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TRAV12-3	A0A0B4J271	114 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	PIGBOS1	A0A0B4J2F0	54 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TRGV4	A0A0C4DH28	118 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SPINK4	O60575	86 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	MEOX2	P50222	304 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	PPT1	P50897	306 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TAS2R20	P59543	309 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	LYZ	P61626	148 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	VBP1	P61758	197 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	OR2F1	Q13607	317 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	LAGE3	Q14657	143 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ZNF846	Q147U1	533 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	OR10J3	Q5JRS4	329 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	C1orf194	Q5T5A4	169 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	LCE1A	Q5T7P2	110 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TERB2	Q8NHR7	220 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ZFAND1	Q8TCF1	268 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	PCNP	Q8WW12	178 aa	Known RBP	3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	MRGPRF	Q96AM1	343 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SCGB3A2	Q96PL1	93 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SLC25A31	Q9H0C2	315 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SLC25A22	Q9H936	323 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	NDUFA13	Q9P0J0	144 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	COMMD3	Q9UBI1	195 aa		3.68	□□□□□ -1.82
RACGAP1-223	ENST00000551260	IGKV1OR2-108	A0A075B7D4	117 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	INS-IGF2	F8WCM5	200 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	GABARAP	H6UMI1	98 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	GPR31	O00270	319 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ATG12	O94817	140 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SMIM18	P0DKX4	95 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	RCVRN	P35243	200 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	NUP62	P37198	522 aa	Predicted RBP	3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	RFX2	P48378	723 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	RND3	P61587	244 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TSPAN5	P62079	268 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	PRR3	P79522	188 aa	Known RBP	3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ZNF90	Q03938	601 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SURF2	Q15527	256 aa	Predicted RBP	3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	BSX	Q3C1V8	233 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	C4orf46	Q504U0	113 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	OR8G2P	Q6IF36	304 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	REG3G	Q6UW15	175 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	LINC00299	Q6ZSB3	139 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	DAZ4	Q86SG3	579 aa	Known RBP	3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CCDC190	Q86UF4	302 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TMEM229B	Q8NBD8	167 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	OR5H2	Q8NGV7	314 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	VGLL1	Q99990	258 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	C20orf144	Q9BQM9	153 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	IFT46	Q9NQC8	304 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	DAZ3	Q9NR90	486 aa	Known RBP	3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	RSL24D1	Q9UHA3	163 aa	Known RBP	3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	VAX2	Q9UIW0	290 aa		3.67	□□□□□ -1.82
RACGAP1-223	ENST00000551260	IGKV1D-37	A0A075B6S9	117 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TRAV8-6	A0A0B4J262	113 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CTDSP2	O14595	271 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	PITX3	O75364	302 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	IGKV1-5	P01602	117 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CHTF8	P0CG12	524 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	GALR1	P47211	349 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ATP5I	P56385	69 aa	Predicted RBP	3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	NCS1	P62166	190 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	LSM3	P62310	102 aa	Known RBP	3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SLA	Q13239	276 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	MEF2D	Q14814	521 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CNPY1	Q3B7I2	92 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	PHLDA2	Q53GA4	152 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	LHFPL1	Q86WI0	220 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	SLC24A4	Q8NFF2	622 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	OR1B1	Q8NGR6	318 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ATP6V0E2	Q8NHE4	81 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	DYNC2LI1	Q8TCX1	351 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TMEM170A	Q8WVE7	144 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	RRNAD1	Q96FB5	475 aa	Known RBP	3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ZNF479	Q96JC4	524 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	TXNDC17	Q9BRA2	123 aa		3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.66	□□□□□ -1.82
RACGAP1-223	ENST00000551260	CCDC59	Q9P031	241 aa	Known RBP	3.66	□□□□□ -1.82

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