RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PTPRBP23467 1997 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 RTTNQ86VV8 2226 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 IGHV3OR15-7A0A075B7D8 119 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 SPTY2D1-AS1A0A0U1RR47 76 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 LINC01549A6NIU2 74 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 F8WDY8 70 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 J3KT08 172 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 K7EM74 188 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 FCGR3BO75015 233 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 SNCGO76070 127 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 ZFAND5O76080 213 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 NDUFA7O95182 113 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 TGFAP01135 160 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 CRYGDP07320 174 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 SLC25A16P16260 332 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 RPL7P18124 248 aaKnown RBP4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 ORM2P19652 201 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 GFERP55789 205 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 LOXL3P58215 753 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 ERVK-16P61578 105 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 BEAN1Q3B7T3 259 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 C10orf113Q5VZT2 155 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 AAED1Q7RTV5 226 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 DTX2Q86UW9 622 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 NDUFA11Q86Y39 141 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 C3orf22Q8N5N4 141 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 Q8NA96 180 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 C15orf53Q8NAA6 179 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 DAZAP1Q96EP5 407 aaKnown RBP4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 VKORC1Q9BQB6 163 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 SRSF8Q9BRL6 282 aaKnown RBP4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 TPPP3Q9BW30 176 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 MRPL20Q9BYC9 149 aaKnown RBP4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 LTBP2Q14767 1821 aa4.11□□□□□ -1.75
LSM3P2-201ENST00000551246 SPAG17Q6Q759 2223 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 IGHV3-15A0A0B4J1V0 119 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 IGHV3-20A0A0C4DH32 117 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 C9JAW5 83 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 LGALS9O00182 355 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 NPFFO15130 113 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 SPINT2O43291 252 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 IGLC6P0CF74 106 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 SCGB1C2P0DMR2 95 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 PSMB2P49721 201 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 HES1Q14469 280 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 TWIST1Q15672 202 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 ZNF672Q499Z4 452 aaPredicted RBP4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 Q71RC1 249 aaPredicted RBP4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 TMEM219Q86XT9 240 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 YAF2Q8IY57 180 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 Q8N8P6 123 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 TMEM75Q8N9X5 138 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 OR13A1Q8NGR1 328 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 FAM57AQ8TBR7 257 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 HIST1H4GQ99525 98 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 RTL8AQ9BWD3 113 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 NXT2Q9NPJ8 142 aaKnown RBP4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 NDUFA4L2Q9NRX3 87 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 CALYQ9NYX4 217 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 MRPL35Q9NZE8 188 aaKnown RBP4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 FZR1Q9UM11 496 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 HIGD1AQ9Y241 93 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 USF3Q68DE3 2245 aa4.1□□□□□ -1.75
LSM3P2-201ENST00000551246 ZNF407Q9C0G0 2248 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 LOC107984640A0A0U1RRK4 108 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 K7ENP7 123 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 TIMM23O14925 209 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 UQCRQO14949 82 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 SLC25A20O43772 301 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 COX7A2P2O60397 106 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 IGLV3-19P01714 112 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 ATP5G1P05496 136 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 IGHV4-34P06331 123 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 CRYGAP11844 174 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 PLNP26678 52 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 LEPP41159 167 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 DEFB103AP81534 67 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 CFHR1Q03591 330 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 TCF15Q12870 199 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 AMN1Q8IY45 258 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 VKORC1L1Q8N0U8 176 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 C10orf126Q8N4M7 172 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 KIR2DL5BQ8NHK3 375 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 MRAPQ8TCY5 172 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 SRSF12Q8WXF0 261 aaKnown RBP4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 TIMD4Q96H15 378 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 S1PR3Q99500 378 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 Q9H3A6 140 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 LINC00574Q9H8X3 128 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 ENY2Q9NPA8 101 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 NGBQ9NPG2 151 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 ONECUT1Q9UBC0 465 aa4.09□□□□□ -1.75
LSM3P2-201ENST00000551246 IGHV1-45A0A0A0MS14 117 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 TRAV40A0A0B4J280 105 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 LOC389332A0A1B0GUA5 103 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 CGB1A6NKQ9 187 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 EPM2AB3EWF7 344 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms