RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 TNXBP22105 4242 aa2.45□□□□□ -2.02
LIMA1-206ENST00000550611 A0A087X0K7 114 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 TEX48A0A1B0GUV7 120 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 TMEM235A6NFC5 223 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 KRBOX1C9JBD0 128 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 INS-IGF2F8WCM5 200 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 CCSO14618 274 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 GNG7O60262 68 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 SNAPC5O75971 98 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 KRASP01116 189 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 IGKV1-17P01599 117 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 EIF4EP06730 217 aaKnown RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 HLA-DRB4P13762 266 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 G6PCP35575 357 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 LPAR6P43657 344 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 P2RY1P47900 373 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 DEFA1P59665 94 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 DEFA3P59666 94 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 HSPE1P61604 102 aaKnown RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 NUTF2P61970 127 aaKnown RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 MLLT11Q13015 90 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 CATR1Q13166 79 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 BTN1A1Q13410 526 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 GUK1Q16774 197 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 FAM222AQ5U5X8 452 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 IZUMO2Q6UXV1 221 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 C8orf59Q8N0T1 100 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 C1orf158Q8N1D5 194 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 C15orf53Q8NAA6 179 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 BEST4Q8NFU0 473 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 OR10G8Q8NGN5 311 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 OR51H1Q8NH63 302 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 FRZBQ92765 325 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 SEC22AQ96IW7 307 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 C2orf48Q96LS8 159 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 TMEM56Q96MV1 263 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 HINT2Q9BX68 163 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 PARD6GQ9BYG4 376 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 ATG5Q9H1Y0 275 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 FNDC4Q9H6D8 234 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 TMEM231Q9H6L2 316 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 ACOT13Q9NPJ3 140 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 FAM212BQ9NTI7 297 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 COPZ2Q9P299 210 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 NAGKQ9UJ70 344 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 STRAPQ9Y3F4 350 aaKnown RBP2.44□□□□□ -2.02
LIMA1-206ENST00000550611 LINC00588Q9Y4M8 146 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 RFNGQ9Y644 331 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 HLA-DRB4X5D2U9 266 aa2.44□□□□□ -2.02
LIMA1-206ENST00000550611 LPAP08519 4548 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 A0A087WZ39 114 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 A0A1B0GV72 72 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 TRDV1A0A1B0GX56 115 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 HELTA6NFD8 242 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 A8MTW9 85 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 TSTD3H0UI37 97 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 PDCD5O14737 125 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 IGKV1-39P01597 117 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 IGKV1D-39P04432 117 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 P0C879 139 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 RAB3BP20337 219 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 EMP1P54849 157 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 RAB2AP61019 212 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 ERVK-16P61578 105 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 PRCDQ00LT1 54 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 DHRS2Q13268 280 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 BSXQ3C1V8 233 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 RNASE10Q5GAN6 216 aaKnown RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 PSMG4Q5JS54 123 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 OGFRL1Q5TC84 451 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 GDF5OSQ5U4N7 250 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 AADACL3Q5VUY0 350 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 TRIQKQ629K1 86 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 Q6ZRN7 208 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 C12orf45Q8N5I9 185 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 ZNF709Q8N972 641 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 STXBP6Q8NFX7 210 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 OR4X1Q8NH49 305 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 LGALS14Q8TCE9 139 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 RNASE8Q8TDE3 154 aaKnown RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 MRGPRFQ96AM1 343 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 PACRGQ96M98 296 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 METTL26Q96S19 204 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 MGLLQ99685 303 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 GPN1Q9HCN4 374 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 MCUBQ9NWR8 336 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 CACNG5Q9UF02 275 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 ANAPC10Q9UM13 185 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 PYGO1Q9Y3Y4 419 aa2.43□□□□□ -2.02
LIMA1-206ENST00000550611 YTHDF2Q9Y5A9 579 aaKnown RBP2.43□□□□□ -2.02
LIMA1-206ENST00000550611 A0A087WXM4 84 aa2.42□□□□□ -2.02
LIMA1-206ENST00000550611 A0A1W2PPV4 95 aa2.42□□□□□ -2.02
LIMA1-206ENST00000550611 PLAC8L1A1L4L8 177 aa2.42□□□□□ -2.02
LIMA1-206ENST00000550611 K7EQM0 130 aa2.42□□□□□ -2.02
LIMA1-206ENST00000550611 SOCS3O14543 225 aa2.42□□□□□ -2.02
LIMA1-206ENST00000550611 SCO1O75880 301 aa2.42□□□□□ -2.02
LIMA1-206ENST00000550611 SCGNO76038 276 aa2.42□□□□□ -2.02
LIMA1-206ENST00000550611 PTTG1O95997 202 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms