RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 GAGE12BA1L429 117 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 H3BNG1 76 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 H3BQ15 152 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 GAGE7O76087 117 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 MBPP02686 304 aaPredicted RBP15.03■□□□□ -0
SMARCC2-210ENST00000550519 GAGE12FP0CL80 117 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 GAGE12GP0CL81 117 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 GAGE12IP0CL82 117 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 BTCP35070 178 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 OPCMLQ14982 345 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 TTC32Q5I0X7 151 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 TRIQKQ629K1 86 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 MITD1Q8WV92 249 aa15.03■□□□□ -0
SMARCC2-210ENST00000550519 A0A0J9YY99 117 aa15.02■□□□□ -0
SMARCC2-210ENST00000550519 RLN2P04090 185 aa15.02■□□□□ -0
SMARCC2-210ENST00000550519 ESRGQ1W209 222 aa15.02■□□□□ -0
SMARCC2-210ENST00000550519 C10orf113Q5VZT2 155 aa15.02■□□□□ -0
SMARCC2-210ENST00000550519 SPATA12Q7Z6I5 190 aa15.02■□□□□ -0
SMARCC2-210ENST00000550519 ODF3Q96PU9 254 aa15.02■□□□□ -0
SMARCC2-210ENST00000550519 RBM38Q9H0Z9 239 aaKnown RBP15.02■□□□□ -0
SMARCC2-210ENST00000550519 SNURFLB1AK76 121 aa15.01□□□□□ -0.01
SMARCC2-210ENST00000550519 CT45A10P0DMU9 189 aa15.01□□□□□ -0.01
SMARCC2-210ENST00000550519 SDHCQ99643 169 aaPredicted RBP15.01□□□□□ -0.01
SMARCC2-210ENST00000550519 DNAJC4Q9NNZ3 241 aa15.01□□□□□ -0.01
SMARCC2-210ENST00000550519 APOBP04114 4563 aaKnown RBP15□□□□□ -0.01
SMARCC2-210ENST00000550519 LINC00854A0A1B0GVQ3 168 aa15□□□□□ -0.01
SMARCC2-210ENST00000550519 A0A1W2PPQ1 181 aa15□□□□□ -0.01
SMARCC2-210ENST00000550519 NPIPB6E9PJ23 425 aa15□□□□□ -0.01
SMARCC2-210ENST00000550519 DAZ2Q13117 558 aaKnown RBP15□□□□□ -0.01
SMARCC2-210ENST00000550519 ZNF431Q8TF32 576 aaPredicted RBP15□□□□□ -0.01
SMARCC2-210ENST00000550519 MRPS16Q9Y3D3 137 aaKnown RBP15□□□□□ -0.01
SMARCC2-210ENST00000550519 DNAH5Q8TE73 4624 aa14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 J3KRW8 73 aa14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 BTF3P20290 206 aaKnown RBP14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 LEPP41159 167 aa14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 CAMLGP49069 296 aa14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 GUK1Q16774 197 aa14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 Q8N1X5 172 aa14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 PYGO2Q9BRQ0 406 aa14.99□□□□□ -0.01
SMARCC2-210ENST00000550519 TRAV5A0A0B4J249 113 aa14.98□□□□□ -0.01
SMARCC2-210ENST00000550519 TRAV12-3A0A0B4J271 114 aa14.98□□□□□ -0.01
SMARCC2-210ENST00000550519 CENPXA8MT69 81 aa14.98□□□□□ -0.01
SMARCC2-210ENST00000550519 Q6ZRG5 221 aa14.98□□□□□ -0.01
SMARCC2-210ENST00000550519 NRARPQ7Z6K4 114 aa14.98□□□□□ -0.01
SMARCC2-210ENST00000550519 TMPRSS5Q9H3S3 457 aa14.98□□□□□ -0.01
SMARCC2-210ENST00000550519 KRTAP10-2P60368 255 aa14.97□□□□□ -0.01
SMARCC2-210ENST00000550519 RAB31Q13636 194 aa14.97□□□□□ -0.01
SMARCC2-210ENST00000550519 CNPY1Q3B7I2 92 aa14.97□□□□□ -0.01
SMARCC2-210ENST00000550519 MIC13Q5XKP0 118 aa14.97□□□□□ -0.01
SMARCC2-210ENST00000550519 Q6ZTI0 123 aa14.97□□□□□ -0.01
SMARCC2-210ENST00000550519 L7N2F9 121 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 CCSO14618 274 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 ZNF253O75346 499 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 VAMP2P63027 116 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 OR1L4Q8NGR5 311 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 C18orf15Q96N68 181 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 C11orf1Q9H5F2 150 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 ZNF586Q9NXT0 402 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 WDR83OSQ9Y284 106 aa14.96□□□□□ -0.01
SMARCC2-210ENST00000550519 SLC25A5P05141 298 aaKnown RBP14.95□□□□□ -0.02
SMARCC2-210ENST00000550519 MRPL53Q96EL3 112 aaKnown RBP14.95□□□□□ -0.02
SMARCC2-210ENST00000550519 VSIG2Q96IQ7 327 aa14.95□□□□□ -0.02
SMARCC2-210ENST00000550519 A0A096LPF7 62 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 CST7O76096 145 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 IL7P13232 177 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 BCAP31P51572 246 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 CAV2P51636 162 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 ZNF846Q147U1 533 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 VWC2Q2TAL6 325 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 C11orf72Q8NBR9 251 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 PFDN5Q99471 154 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 UQCC1Q9NVA1 299 aa14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 LSM5Q9Y4Y9 91 aaKnown RBP14.94□□□□□ -0.02
SMARCC2-210ENST00000550519 TRBV19A0A075B6N1 114 aa14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 M0R3E3 92 aa14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 RPL29P47914 159 aaKnown RBP14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 ZNF680Q8NEM1 530 aa14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 LINC00467Q9BRT7 94 aa14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 C20orf85Q9H1P6 137 aa14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 SCRT2Q9NQ03 307 aa14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 GSN-AS1Q9NRJ2 163 aa14.93□□□□□ -0.02
SMARCC2-210ENST00000550519 C7orf71A4D174 169 aa14.92□□□□□ -0.02
SMARCC2-210ENST00000550519 FAM24AA6NFZ4 105 aa14.92□□□□□ -0.02
SMARCC2-210ENST00000550519 KLLNB2CW77 178 aa14.92□□□□□ -0.02
SMARCC2-210ENST00000550519 ZNF324O75467 553 aaPredicted RBP14.92□□□□□ -0.02
SMARCC2-210ENST00000550519 CHAC2Q8WUX2 184 aa14.92□□□□□ -0.02
SMARCC2-210ENST00000550519 FAM19A4Q96LR4 140 aa14.92□□□□□ -0.02
SMARCC2-210ENST00000550519 SLC39A9Q9NUM3 307 aa14.92□□□□□ -0.02
SMARCC2-210ENST00000550519 TRGV2A0A075B6R0 118 aa14.91□□□□□ -0.02
SMARCC2-210ENST00000550519 PLA2G10O15496 165 aa14.91□□□□□ -0.02
SMARCC2-210ENST00000550519 NDUFB4O95168 129 aa14.91□□□□□ -0.02
SMARCC2-210ENST00000550519 ERCC8Q13216 396 aa14.91□□□□□ -0.02
SMARCC2-210ENST00000550519 ANXA2RQ3ZCQ2 193 aa14.91□□□□□ -0.02
SMARCC2-210ENST00000550519 C12orf45Q8N5I9 185 aaPredicted RBP14.91□□□□□ -0.02
SMARCC2-210ENST00000550519 TMEM14CQ9P0S9 112 aa14.91□□□□□ -0.02
SMARCC2-210ENST00000550519 FAM25EA8MYX2 175 aa14.9□□□□□ -0.02
SMARCC2-210ENST00000550519 LINC00315P59091 139 aa14.9□□□□□ -0.02
SMARCC2-210ENST00000550519 CD300CQ08708 224 aa14.9□□□□□ -0.02
SMARCC2-210ENST00000550519 Q6ZRN7 208 aaPredicted RBP14.9□□□□□ -0.02
SMARCC2-210ENST00000550519 LINC00477Q96M19 166 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms