RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 FER1L6-AS1Q8NA97 138 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 C8orf49Q96NF6 230 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 MAP1LC3CQ9BXW4 147 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 TMEM191AQ9H0A3 160 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 PPP1R14DQ9NXH3 145 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 UQCR10Q9UDW1 63 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 PAM16Q9Y3D7 125 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 LENEPQ9Y5L5 61 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 U3KQE9 123 aa6.93□□□□□ -1.3
TMEM116-209ENST00000550020 PRRC2CQ9Y520 2896 aaKnown RBP6.93□□□□□ -1.3
TMEM116-209ENST00000550020 HSBP1L1C9JCN9 74 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 LEPROTL1O95214 131 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 ARMS2P0C7Q2 107 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 COX6B1P14854 86 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 CRIP1P50238 77 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 ZNF138P52744 262 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 SSTP61278 116 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 SPATA45Q537H7 98 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 PET117Q6UWS5 81 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 SMIM15Q7Z3B0 74 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 ORMDL3Q8N138 153 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 FAM19A2Q8N3H0 131 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 PRSS3P2Q8NHM4 247 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 TPPP3Q9BW30 176 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
TMEM116-209ENST00000550020 TRAV9-2A0A087WT02 112 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 TMEM89A2RUT3 159 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 H3BUX3 64 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 OVOL1O14753 267 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 CRXO43186 299 aaPredicted RBP6.91□□□□□ -1.3
TMEM116-209ENST00000550020 ORM1P02763 201 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 FAM104BQ5XKR9 115 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 LYZL1Q6UWQ5 148 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 TMEM219Q86XT9 240 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 BCL6BQ8N143 479 aaPredicted RBP6.91□□□□□ -1.3
TMEM116-209ENST00000550020 Q8N976 141 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 OR10AG1Q8NH19 301 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 PIFOQ8TCI5 191 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 AP5S1Q9NUS5 200 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 U3KQK5 164 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 PCNX1Q96RV3 2341 aa6.91□□□□□ -1.3
TMEM116-209ENST00000550020 TLN1Q9Y490 2541 aaKnown RBP6.91□□□□□ -1.3
TMEM116-209ENST00000550020 ROS1P08922 2347 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 IGHV3OR16-10A0A075B7F0 116 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 IGHV4-30-2A0A087WSY4 118 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 CLPSL1A2RUU4 121 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 CACNG7P62955 275 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 TWIST1Q15672 202 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 BRD3OSQ6XYD6 125 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 C9orf47Q6ZRZ4 202 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 C8orf86Q6ZUL3 223 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 OR10J6PQ8NGY7 276 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 LINC00477Q96M19 166 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 PRELID3AQ96N28 172 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 VGLL1Q99990 258 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 MGAQ8IWI9 3026 aa6.9□□□□□ -1.3
TMEM116-209ENST00000550020 NAV3Q8IVL0 2385 aa6.9□□□□□ -1.31
TMEM116-209ENST00000550020 PIEZO2Q9H5I5 2752 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 TMSB15BA0A087X1C1 80 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV3-35A0A0C4DH35 117 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 C2orf70A6NJV1 201 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 LINC01548A6NM66 108 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 SYS1-DBNDD2H3BUS1 97 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV4-38-2P0DP08 117 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 PF4V1P10720 104 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 CD33P20138 364 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 PSMG4Q5JS54 123 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 GLMPQ8WWB7 406 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 CNFNQ9BYD5 112 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 NPFFR1Q9GZQ6 430 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
TMEM116-209ENST00000550020 DSPP15924 2871 aaKnown RBP6.88□□□□□ -1.31
TMEM116-209ENST00000550020 K7EMT4 169 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 IGHG4P01861 327 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 PPIFP30405 207 aaKnown RBP6.88□□□□□ -1.31
TMEM116-209ENST00000550020 CKS2P33552 79 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
TMEM116-209ENST00000550020 LY6EQ16553 131 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 FAM106AQ4KMX7 169 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 EBLN2Q6P2I7 272 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 TEX29Q8N6K0 151 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 ZNF738Q8NE65 137 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 Q8TAT8 98 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 MS4A6AQ9H2W1 248 aa6.88□□□□□ -1.31
TMEM116-209ENST00000550020 CEP295Q9C0D2 2601 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV3OR16-8A0A075B7F1 116 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 D6R8Y8 96 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 IGLV1-40P01703 118 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 RPLP1P05386 114 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms