RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 BCL6BQ8N143 479 aaPredicted RBP7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 LY6G5BQ8NDX9 201 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 AJUBAQ96IF1 538 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 DNAJC30Q96LL9 226 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 IGHV4-61A0A0C4DH41 118 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 IGLC7A0M8Q6 106 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 TNFRSF13BO14836 293 aaPredicted RBP7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 PLXND1Q9Y4D7 1925 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 NUP35Q8NFH5 326 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 COL5A1P20908 1838 aaPredicted RBP7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 TRBV25-1A0A075B6N4 114 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 IGKV3OR2-268A0A0C4DH90 116 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 NEGR1Q7Z3B1 354 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 C5orf30Q96GV9 206 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 C20orf78Q9BR46 151 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 LIME1Q9H400 295 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 I3L3M4 83 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 RPL35AP18077 110 aaKnown RBP7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 HSD52Q0P140 79 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 Q0VG73 95 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 DEFB121Q5J5C9 76 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 LYPD6Q86Y78 171 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 SIRPDQ9H106 197 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 TRBV7-9A0A0J9YWB2 115 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 PGPEP1LA6NFU8 196 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 MED14OSP0DP75 135 aa7.33□□□□□ -1.24
PPFIA2-216ENST00000549396 NUP210LQ5VU65 1888 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 CCL24O00175 119 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 NDPQ00604 133 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 C18orf15Q96N68 181 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 PRR25Q96S07 402 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 UBE2CO00762 179 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 Q8N8P6 123 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 C4orf3Q8WVX3 66 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 ZNRD1Q9P1U0 126 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 IGLV11-55A0A075B6I3 123 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 IGHV4-30-2A0A087WSY4 118 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 TRBV6-1A0A0K0K1D8 114 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 GPHB5Q86YW7 130 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 D6R8Y8 96 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 MRPL16Q9NX20 251 aaKnown RBP7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 ZNF581Q9P0T4 197 aa7.32□□□□□ -1.24
PPFIA2-216ENST00000549396 CLPSL1A2RUU4 121 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 IL15RAQ13261 267 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 LINC00518Q8N0U6 118 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 C5orf56Q8N8D9 126 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 ZNF491Q8N8L2 437 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 CD5LO43866 347 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 CXCL1P09341 107 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 C11orf44Q8N8P7 122 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 CACNA1EQ15878 2313 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 G3V318 75 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 M0R2P5 195 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 IGLV1-47P01700 117 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 IGHG2P01859 326 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 ARMS2P0C7Q2 107 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 CSTL1Q9H114 145 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 ASXL3Q9C0F0 2248 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 LOC102724200A0A096LPH7 203 aaPredicted RBP7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 RHOHQ15669 191 aa7.31□□□□□ -1.24
PPFIA2-216ENST00000549396 C21orf62-AS1Q17RA5 79 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 C16orf74Q96GX8 76 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 MEGF9Q9H1U4 602 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 FAM120AOSQ5T036 256 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 CA1P00915 261 aaPredicted RBP7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 FAM104BQ5XKR9 115 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 IGHV7-81A0A0B4J1V7 117 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 PSCAO43653 123 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 AZU1P20160 251 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 ST6GALNAC6Q969X2 333 aa7.3□□□□□ -1.24
PPFIA2-216ENST00000549396 A0A087X0K7 114 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 TRAV2A0A0B4J234 112 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HOXD3P31249 432 aaPredicted RBP7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 LSM4Q9Y4Z0 139 aaKnown RBP7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 A6NDX4 124 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 IGHV4-59P01825 116 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 DUX4L9Q6RFH8 374 aaPredicted RBP7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 FXYD5Q96DB9 178 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 I3L2K1 104 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BKO60814 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 MMP23AO75900 390 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 LTAP01374 205 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BJP06899 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BOP23527 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BBP33778 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BDP58876 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BCP62807 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST2H2BEQ16778 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BHQ93079 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BNQ99877 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 HIST1H2BMQ99879 126 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 LRRK1Q38SD2 2015 aa7.29□□□□□ -1.24
PPFIA2-216ENST00000549396 SMIM27A0A1W2PRY6 76 aa7.28□□□□□ -1.24
PPFIA2-216ENST00000549396 ZNF815PA8K554 130 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms