RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ACTR3CQ9C0K3 210 aaPredicted RBP9.64□□□□□ -0.87
CDX2-202ENST00000548877 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 TMEM189A5PLL7 270 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 IFNA1P01562 189 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 SPART-AS1P0CW21 52 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 FFAR4Q5NUL3 377 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 BPIFCQ8NFQ6 507 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 STXBP6Q8NFX7 210 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 TMEM170AQ8WVE7 144 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 SEPSECSQ9HD40 501 aaKnown RBP9.63□□□□□ -0.87
CDX2-202ENST00000548877 RPRMQ9NS64 109 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 SLC39A9Q9NUM3 307 aa9.63□□□□□ -0.87
CDX2-202ENST00000548877 CTXND1A0A1B0GTU2 59 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 SMIM9A6NGZ8 99 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 ZNF705FA8MVS1 300 aaPredicted RBP9.62□□□□□ -0.87
CDX2-202ENST00000548877 ZNF705DP0CH99 300 aaPredicted RBP9.62□□□□□ -0.87
CDX2-202ENST00000548877 ZNF705BP0CI00 300 aaPredicted RBP9.62□□□□□ -0.87
CDX2-202ENST00000548877 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
CDX2-202ENST00000548877 FHITP49789 147 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 PPT1P50897 306 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 NUTF2P61970 127 aaKnown RBP9.62□□□□□ -0.87
CDX2-202ENST00000548877 TNP2Q05952 138 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 GUK1Q16774 197 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 SEC11CQ9BY50 192 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 EIF5A2Q9GZV4 153 aaKnown RBP9.62□□□□□ -0.87
CDX2-202ENST00000548877 U3KQE9 123 aa9.62□□□□□ -0.87
CDX2-202ENST00000548877 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
CDX2-202ENST00000548877 AGPAT2O15120 278 aa9.61□□□□□ -0.87
CDX2-202ENST00000548877 NDUFS6O75380 124 aaKnown RBP9.61□□□□□ -0.87
CDX2-202ENST00000548877 OR10G4Q8NGN3 311 aa9.61□□□□□ -0.87
CDX2-202ENST00000548877 OR10G9Q8NGN4 311 aa9.61□□□□□ -0.87
CDX2-202ENST00000548877 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
CDX2-202ENST00000548877 LINC00052Q96N35 136 aa9.61□□□□□ -0.87
CDX2-202ENST00000548877 METTL26Q96S19 204 aa9.61□□□□□ -0.87
CDX2-202ENST00000548877 A0A1W2PPV4 95 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 MAP1LC3B2A6NCE7 125 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 RBFOX3A6NFN3 312 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 F8W036 122 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 H3BMM0 161 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 SELENOTP62341 195 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 KHDC3LQ587J8 217 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 SVBPQ8N300 66 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 MAP1LC3BQ9GZQ8 125 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 XCL2Q9UBD3 114 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 DKK2Q9UBU2 259 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 PXMP4Q9Y6I8 212 aa9.6□□□□□ -0.87
CDX2-202ENST00000548877 HELTA6NFD8 242 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 CLN5O75503 358 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 CDC34P49427 236 aaPredicted RBP9.59□□□□□ -0.87
CDX2-202ENST00000548877 B2MP61769 119 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 RHOBP62745 196 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 C10orf91Q5T1B1 145 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 MGST2Q99735 147 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 SLC35B3Q9H1N7 401 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 MANBALQ9NQG1 85 aa9.59□□□□□ -0.87
CDX2-202ENST00000548877 CARHSP1Q9Y2V2 147 aaKnown RBP9.59□□□□□ -0.87
CDX2-202ENST00000548877 APOC3P02656 99 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 GAMTQ14353 236 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 PSMG4Q5JS54 123 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 C16orf54Q6UWD8 224 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 LCN15Q6UWW0 184 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 OR4X1Q8NH49 305 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 CLUHP3Q96NS8 147 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 SLC45A2Q9UMX9 530 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 RFNGQ9Y644 331 aa9.58□□□□□ -0.88
CDX2-202ENST00000548877 SCGB2A1O75556 95 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 SNAPINO95295 136 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 IGKV1-17P01599 117 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 FABP1P07148 127 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 SFTA3P0C7M3 94 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 HLA-DRB4P13762 266 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 PSMB3P49720 205 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 FAM122CQ6P4D5 195 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 THAP8Q8NA92 274 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 SUN5Q8TC36 379 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 RAB24Q969Q5 203 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 FNDC4Q9H6D8 234 aaPredicted RBP9.57□□□□□ -0.88
CDX2-202ENST00000548877 MRPL36Q9P0J6 103 aaKnown RBP9.57□□□□□ -0.88
CDX2-202ENST00000548877 VAX2Q9UIW0 290 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 HLA-DRB4X5D2U9 266 aa9.57□□□□□ -0.88
CDX2-202ENST00000548877 BCL2P10415 239 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 TAS2R45P59539 299 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 SNRPD3P62318 126 aaKnown RBP9.56□□□□□ -0.88
CDX2-202ENST00000548877 ZNF726P1Q15940 193 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 MIC13Q5XKP0 118 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 CYP2G1PQ6ZSU1 146 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 C15orf53Q8NAA6 179 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 OR1L4Q8NGR5 311 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 ACY3Q96HD9 319 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 PFDN5Q99471 154 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 TXNDC17Q9BRA2 123 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 SLC25A22Q9H936 323 aa9.56□□□□□ -0.88
CDX2-202ENST00000548877 GNG13Q9P2W3 67 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms