RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 BIRC6Q9NR09 4857 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 IGSF23A1L1A6 192 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 ZNF253O75346 499 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 FGF7P21781 194 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 TAS2R60P59551 318 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 ZNF493Q6ZR52 646 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 BAP18Q8IXM2 172 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 KMT2AQ03164 3969 aa8.11□□□□□ -1.11
BEST3-209ENST00000548658 TRAV12-2A0A075B6T6 113 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 ZNF705GA8MUZ8 300 aaPredicted RBP8.1□□□□□ -1.11
BEST3-209ENST00000548658 INMT-MINDY4F8WBC2 141 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 H7BYZ3 331 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 MORN5Q5VZ52 161 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 SAT2Q96F10 170 aaPredicted RBP8.1□□□□□ -1.11
BEST3-209ENST00000548658 C16orf74Q96GX8 76 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 MARVELD1Q9BSK0 173 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 KCNIP2Q9NS61 270 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 TMEM14CQ9P0S9 112 aa8.1□□□□□ -1.11
BEST3-209ENST00000548658 H3BQ15 152 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 SNRPCP09234 159 aaKnown RBP8.09□□□□□ -1.11
BEST3-209ENST00000548658 PET100P0DJ07 73 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 HTN3P15516 51 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 PDE6HQ13956 83 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 OR5C1Q8NGR4 320 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 MRPL53Q96EL3 112 aaKnown RBP8.09□□□□□ -1.11
BEST3-209ENST00000548658 ODF3Q96PU9 254 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 NPCDR1Q9BY65 106 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 PRELID1Q9Y255 219 aa8.09□□□□□ -1.11
BEST3-209ENST00000548658 TRBV19A0A075B6N1 114 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 TRAV5A0A0B4J249 113 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 SLC17A3O00476 420 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 HIST1H1EP10412 219 aaKnown RBP8.08□□□□□ -1.12
BEST3-209ENST00000548658 HTN1P15515 57 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 IFITM3Q01628 133 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 NHLH2Q02577 135 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 RNF212Q495C1 297 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 LRRC37A5PQ49AS3 106 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 UBE2DNLQ8IWF7 75 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 CCDC28AQ8IWP9 274 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 C15orf53Q8NAA6 179 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 AAMDCQ9H7C9 122 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 BATF3Q9NR55 127 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 ZNF586Q9NXT0 402 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 TIMM9Q9Y5J7 89 aa8.08□□□□□ -1.12
BEST3-209ENST00000548658 TIMM8BQ9Y5J9 83 aaPredicted RBP8.08□□□□□ -1.12
BEST3-209ENST00000548658 CBY3A6NI87 242 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 C17orf112F2Z3M2 114 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 H3BTX0 84 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 SIX6O95475 246 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 DEFB130BP0DP73 79 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 DEFB130AP0DP74 79 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 AZU1P20160 251 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 LEPP41159 167 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 LINC00336Q6ZUF6 198 aa8.07□□□□□ -1.12
BEST3-209ENST00000548658 TMEM263Q8WUH6 116 aaKnown RBP8.07□□□□□ -1.12
BEST3-209ENST00000548658 PRAC2D3DTV9 90 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 NPIPB6E9PJ23 425 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 SSNA1O43805 119 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 PRM2P04554 102 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 ATP5G1P05496 136 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 ATP5G3P48201 142 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 FAM3BP58499 235 aaPredicted RBP8.06□□□□□ -1.12
BEST3-209ENST00000548658 THAP6Q8TBB0 222 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 PPP1R1CQ8WVI7 109 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 LINC00477Q96M19 166 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 MRPL32Q9BYC8 188 aaKnown RBP8.06□□□□□ -1.12
BEST3-209ENST00000548658 WDR61Q9GZS3 305 aaKnown RBP8.06□□□□□ -1.12
BEST3-209ENST00000548658 OR5AC2Q9NZP5 309 aa8.06□□□□□ -1.12
BEST3-209ENST00000548658 PLAC8L1A1L4L8 177 aa8.05□□□□□ -1.12
BEST3-209ENST00000548658 H0YIZ8 118 aa8.05□□□□□ -1.12
BEST3-209ENST00000548658 SLC25A5P05141 298 aaKnown RBP8.05□□□□□ -1.12
BEST3-209ENST00000548658 H2BFSP57053 126 aa8.05□□□□□ -1.12
BEST3-209ENST00000548658 CLINT1Q14677 625 aa8.05□□□□□ -1.12
BEST3-209ENST00000548658 LGALS9BQ3B8N2 356 aa8.05□□□□□ -1.12
BEST3-209ENST00000548658 TMEM88Q6PEY1 159 aa8.05□□□□□ -1.12
BEST3-209ENST00000548658 RNASE8Q8TDE3 154 aaKnown RBP8.05□□□□□ -1.12
BEST3-209ENST00000548658 PYGO2Q9BRQ0 406 aa8.05□□□□□ -1.12
BEST3-209ENST00000548658 VPS13DQ5THJ4 4388 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 SNURFLB1AK76 121 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 F5H768 121 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 NDUFB4O95168 129 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 MPC2O95563 127 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 NMBP08949 121 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 NBEAP1P0C6P0 100 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 CT45A10P0DMU9 189 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 GFI1BQ5VTD9 330 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 SCGB1C1Q8TD33 95 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 BLNKQ8WV28 456 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 ATP5SQ99766 215 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 OR51M1Q9H341 326 aa8.04□□□□□ -1.12
BEST3-209ENST00000548658 NOP10Q9NPE3 64 aaKnown RBP8.04□□□□□ -1.12
BEST3-209ENST00000548658 TRAV12-3A0A0B4J271 114 aa8.03□□□□□ -1.12
BEST3-209ENST00000548658 M0R3E3 92 aa8.03□□□□□ -1.12
BEST3-209ENST00000548658 IFNA5P01569 189 aa8.03□□□□□ -1.12
BEST3-209ENST00000548658 PYYP10082 97 aa8.03□□□□□ -1.12
BEST3-209ENST00000548658 PRB4P10163 310 aaPredicted RBP8.03□□□□□ -1.12
BEST3-209ENST00000548658 FCN2Q15485 313 aa8.03□□□□□ -1.12
BEST3-209ENST00000548658 GCSAMLQ5JQS6 135 aa8.03□□□□□ -1.12
BEST3-209ENST00000548658 C9orf47Q6ZRZ4 202 aa8.03□□□□□ -1.12
BEST3-209ENST00000548658 ATG101Q9BSB4 218 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms