RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 KCNIP2Q9NS61 270 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 TRAV30A0A087WSZ9 112 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 SCGB2A1O75556 95 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 SNAPINO95295 136 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 APOC3P02656 99 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 HLA-DRB4P13762 266 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 TAGLN2P37802 199 aaKnown RBP11.72□□□□□ -0.53
SSH1-208ENST00000548522 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
SSH1-208ENST00000548522 GUK1Q16774 197 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 SIGLEC15Q6ZMC9 328 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 Q8WTZ3 238 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 HLA-DRB4X5D2U9 266 aa11.72□□□□□ -0.53
SSH1-208ENST00000548522 PRSS46E5RG02 174 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 C17orf112F2Z3M2 114 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 F8W036 122 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 BUB3O43684 328 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 SPART-AS1P0CW21 52 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 NPY1RP25929 384 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 YPEL3P61236 119 aaPredicted RBP11.71□□□□□ -0.53
SSH1-208ENST00000548522 NUTF2P61970 127 aaKnown RBP11.71□□□□□ -0.53
SSH1-208ENST00000548522 OR10G4Q8NGN3 311 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
SSH1-208ENST00000548522 HTN3P15516 51 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 ADCYAP1P18509 176 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 FAM222AQ5U5X8 452 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 OR8G2PQ6IF36 304 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 ZNF709Q8N972 641 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 SLC24A4Q8NFF2 622 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 SUN5Q8TC36 379 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 NPIPB3Q92617 1050 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 ACY3Q96HD9 319 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 NEU1Q99519 415 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 NKX6-2Q9C056 277 aaPredicted RBP11.7□□□□□ -0.54
SSH1-208ENST00000548522 HEYLQ9NQ87 328 aaPredicted RBP11.7□□□□□ -0.54
SSH1-208ENST00000548522 DKK2Q9UBU2 259 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 DNAH5Q8TE73 4624 aa11.7□□□□□ -0.54
SSH1-208ENST00000548522 UBE2L5PA0A1B0GUS4 154 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 SFTA3P0C7M3 94 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 FHITP49789 147 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 SRSF3P84103 164 aaKnown RBP11.69□□□□□ -0.54
SSH1-208ENST00000548522 C2orf83Q53S99 150 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 KHDC3LQ587J8 217 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 SLC35B3Q9H1N7 401 aa11.69□□□□□ -0.54
SSH1-208ENST00000548522 TOMM40O96008 361 aa11.68□□□□□ -0.54
SSH1-208ENST00000548522 PSG1P11464 419 aa11.68□□□□□ -0.54
SSH1-208ENST00000548522 RNASEH2CQ8TDP1 164 aaKnown RBP11.68□□□□□ -0.54
SSH1-208ENST00000548522 RSG1Q9BU20 258 aa11.68□□□□□ -0.54
SSH1-208ENST00000548522 RPRMQ9NS64 109 aa11.68□□□□□ -0.54
SSH1-208ENST00000548522 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
SSH1-208ENST00000548522 RBFOX3A6NFN3 312 aa11.67□□□□□ -0.54
SSH1-208ENST00000548522 RD3LP0DJH9 198 aa11.67□□□□□ -0.54
SSH1-208ENST00000548522 TMEM88Q6PEY1 159 aa11.67□□□□□ -0.54
SSH1-208ENST00000548522 NIPSNAP3BQ9BS92 247 aa11.67□□□□□ -0.54
SSH1-208ENST00000548522 NPCDR1Q9BY65 106 aa11.67□□□□□ -0.54
SSH1-208ENST00000548522 SAV1Q9H4B6 383 aaPredicted RBP11.67□□□□□ -0.54
SSH1-208ENST00000548522 SEPSECSQ9HD40 501 aaKnown RBP11.67□□□□□ -0.54
SSH1-208ENST00000548522 CTXND1A0A1B0GTU2 59 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 TMEM189A5PLL7 270 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 F6UB75 175 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 SOCS3O14543 225 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 IFNA1P01562 189 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 FGF7P21781 194 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 SFT2D1Q8WV19 159 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 EIF5A2Q9GZV4 153 aaKnown RBP11.66□□□□□ -0.54
SSH1-208ENST00000548522 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
SSH1-208ENST00000548522 NACAE9PAV3 2078 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 SMIM9A6NGZ8 99 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 AGPAT2O15120 278 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 PPT1P50897 306 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 AKR1C1Q04828 323 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 ACOT6Q3I5F7 207 aaPredicted RBP11.65□□□□□ -0.54
SSH1-208ENST00000548522 C1orf134Q5TEV5 83 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 FOXI2Q6ZQN5 318 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 C1orf158Q8N1D5 194 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 FAM210BQ96KR6 192 aa11.65□□□□□ -0.54
SSH1-208ENST00000548522 ACTR3CQ9C0K3 210 aaPredicted RBP11.65□□□□□ -0.54
SSH1-208ENST00000548522 YTHDF2Q9Y5A9 579 aaKnown RBP11.65□□□□□ -0.54
SSH1-208ENST00000548522 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
SSH1-208ENST00000548522 C9JQL5 133 aa11.64□□□□□ -0.55
SSH1-208ENST00000548522 SCO1O75880 301 aa11.64□□□□□ -0.55
SSH1-208ENST00000548522 ZNF90Q03938 601 aa11.64□□□□□ -0.55
SSH1-208ENST00000548522 TNP2Q05952 138 aa11.64□□□□□ -0.55
SSH1-208ENST00000548522 RAB31Q13636 194 aa11.64□□□□□ -0.55
SSH1-208ENST00000548522 HERC1Q15751 4861 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 IGKV1D-37A0A075B6S9 117 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 MAP1LC3B2A6NCE7 125 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 BCL2P10415 239 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 GPX4P36969 197 aaPredicted RBP11.63□□□□□ -0.55
SSH1-208ENST00000548522 RHEBQ15382 184 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 ZNF726P1Q15940 193 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 RNF212Q495C1 297 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 SOHLH1Q5JUK2 328 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 CLRN3Q8NCR9 226 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 MAP1LC3BQ9GZQ8 125 aa11.63□□□□□ -0.55
SSH1-208ENST00000548522 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms