RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 COX19Q49B96 90 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 MRPL54Q6P161 138 aaKnown RBP16.09■□□□□ 0.17
RITA1-201ENST00000548278 WDR73Q6P4I2 378 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 LCNL1Q6ZST4 164 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 ZC2HC1AQ96GY0 325 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 ASCL2Q99929 193 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 IGHV3OR16-13A0A075B7E8 117 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 IGHV3-74A0A0B4J1X5 117 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 IGHV3-11P01762 117 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.09■□□□□ 0.17
RITA1-201ENST00000548278 DAZAP1Q96EP5 407 aaKnown RBP16.09■□□□□ 0.17
RITA1-201ENST00000548278 IGHV3-49A0A0A0MS15 119 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 HIGD1CA8MV81 97 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 CHEK1O14757 476 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 MT-ND6P03923 174 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 HLA-DMBP28068 263 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 IGFL4Q6B9Z1 124 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 GBGT1Q8N5D6 347 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 VPREB3Q9UKI3 123 aa16.08■□□□□ 0.16
RITA1-201ENST00000548278 A0A0G2JLM5 398 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 A8MWL6 223 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 NDUFA4O00483 81 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 S100A2P29034 98 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 C16orf54Q6UWD8 224 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 OR4X2Q8NGF9 303 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 IGKV2-40A0A087WW87 121 aaPredicted RBP16.07■□□□□ 0.16
RITA1-201ENST00000548278 IGKV2D-40P01614 121 aaPredicted RBP16.07■□□□□ 0.16
RITA1-201ENST00000548278 UNQ9165/PRO28630Q6UXU0 137 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 WIPF2Q8TF74 440 aaPredicted RBP16.07■□□□□ 0.16
RITA1-201ENST00000548278 HIST1H2BLQ99880 126 aa16.07■□□□□ 0.16
RITA1-201ENST00000548278 TEX15Q9BXT5 2789 aa16.06■□□□□ 0.16
RITA1-201ENST00000548278 FABP4P15090 132 aa16.06■□□□□ 0.16
RITA1-201ENST00000548278 RASL11AQ6T310 242 aa16.06■□□□□ 0.16
RITA1-201ENST00000548278 TCF24Q7RTU0 167 aa16.06■□□□□ 0.16
RITA1-201ENST00000548278 OR4B1Q8NGF8 309 aa16.06■□□□□ 0.16
RITA1-201ENST00000548278 GTSF1Q8WW33 167 aa16.06■□□□□ 0.16
RITA1-201ENST00000548278 PRDM13Q9H4Q3 707 aa16.06■□□□□ 0.16
RITA1-201ENST00000548278 ZNF705FA8MVS1 300 aaPredicted RBP16.05■□□□□ 0.16
RITA1-201ENST00000548278 PSMB8P28062 276 aa16.05■□□□□ 0.16
RITA1-201ENST00000548278 CRIP1P50238 77 aa16.05■□□□□ 0.16
RITA1-201ENST00000548278 LCN12Q6JVE5 192 aa16.05■□□□□ 0.16
RITA1-201ENST00000548278 OR10D4PQ8NGN7 298 aa16.05■□□□□ 0.16
RITA1-201ENST00000548278 C8orf49Q96NF6 230 aa16.05■□□□□ 0.16
RITA1-201ENST00000548278 GFRA4Q9GZZ7 299 aa16.05■□□□□ 0.16
RITA1-201ENST00000548278 HLA-DQA1P01909 254 aa16.04■□□□□ 0.16
RITA1-201ENST00000548278 WFDC11Q8NEX6 87 aa16.04■□□□□ 0.16
RITA1-201ENST00000548278 SLC50A1Q9BRV3 221 aa16.04■□□□□ 0.16
RITA1-201ENST00000548278 FBLL1A6NHQ2 334 aaKnown RBP16.04■□□□□ 0.16
RITA1-201ENST00000548278 RAB4BP61018 213 aa16.04■□□□□ 0.16
RITA1-201ENST00000548278 VGLL1Q99990 258 aa16.04■□□□□ 0.16
RITA1-201ENST00000548278 COX8CQ7Z4L0 72 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 GLMPQ8WWB7 406 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 A0A1B0GUS0 222 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 GRIFINA4D1Z8 144 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 FAM231BA6NCW3 169 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 HOXA3O43365 443 aaPredicted RBP16.03■□□□□ 0.16
RITA1-201ENST00000548278 AMBPP02760 352 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 GDF5OSQ5U4N7 250 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 ATP5L2Q7Z4Y8 100 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 RNF182Q8N6D2 247 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 OR2D3Q8NGH3 330 aa16.03■□□□□ 0.16
RITA1-201ENST00000548278 MXRA5Q9NR99 2828 aa16.02■□□□□ 0.16
RITA1-201ENST00000548278 ZNF469Q96JG9 3925 aaPredicted RBP16.02■□□□□ 0.16
RITA1-201ENST00000548278 TRAV8-2A0A0B4J237 113 aa16.02■□□□□ 0.15
RITA1-201ENST00000548278 A0A1B0GXF2 115 aa16.02■□□□□ 0.15
RITA1-201ENST00000548278 FAM209BQ5JX69 171 aa16.02■□□□□ 0.15
RITA1-201ENST00000548278 ITPR3Q14573 2671 aa16.02■□□□□ 0.15
RITA1-201ENST00000548278 HELZ2Q9BYK8 2649 aaKnown RBP16.01■□□□□ 0.15
RITA1-201ENST00000548278 TMEM89A2RUT3 159 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 SMAD7O15105 426 aaKnown RBP16.01■□□□□ 0.15
RITA1-201ENST00000548278 CRISP2P16562 243 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 SAPCD1Q5SSQ6 148 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 C10orf99Q6UWK7 81 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 C8orf86Q6ZUL3 223 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 PACRGQ96M98 296 aaPredicted RBP16.01■□□□□ 0.15
RITA1-201ENST00000548278 PRR25Q96S07 402 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 PRAC2D3DTV9 90 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 FOSL1P15407 271 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 PYY3Q5JQD4 70 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 RBPMS2Q6ZRY4 209 aaKnown RBP16.01■□□□□ 0.15
RITA1-201ENST00000548278 TMEM256Q8N2U0 113 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 ZNF702PQ9H963 129 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 TP53TG3Q9ULZ0 132 aa16.01■□□□□ 0.15
RITA1-201ENST00000548278 CT45A10P0DMU9 189 aa16■□□□□ 0.15
RITA1-201ENST00000548278 GZMBP10144 247 aa16■□□□□ 0.15
RITA1-201ENST00000548278 PGLYRP4Q96LB8 373 aa16■□□□□ 0.15
RITA1-201ENST00000548278 NPFFR1Q9GZQ6 430 aa16■□□□□ 0.15
RITA1-201ENST00000548278 KIAA1644Q3SXP7 199 aa15.99■□□□□ 0.15
RITA1-201ENST00000548278 Q8TAT8 98 aa15.99■□□□□ 0.15
RITA1-201ENST00000548278 PEF1Q9UBV8 284 aaKnown RBP15.99■□□□□ 0.15
RITA1-201ENST00000548278 APCSP02743 223 aa15.99■□□□□ 0.15
RITA1-201ENST00000548278 FOXA3P55318 350 aaPredicted RBP15.99■□□□□ 0.15
RITA1-201ENST00000548278 SLAQ13239 276 aa15.99■□□□□ 0.15
RITA1-201ENST00000548278 RBAKDNA6NC62 111 aa15.98■□□□□ 0.15
RITA1-201ENST00000548278 NUPR1O60356 82 aa15.98■□□□□ 0.15
RITA1-201ENST00000548278 Q0VG73 95 aa15.98■□□□□ 0.15
RITA1-201ENST00000548278 LINC00587B1AMM8 73 aa15.98■□□□□ 0.15
RITA1-201ENST00000548278 CAMPP49913 170 aa15.98■□□□□ 0.15
RITA1-201ENST00000548278 MRPL53Q96EL3 112 aaKnown RBP15.98■□□□□ 0.15
RITA1-201ENST00000548278 LINC00310P59036 64 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms