RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 NRARPQ7Z6K4 114 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 BPIFA4PQ86YQ2 179 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 C12orf45Q8N5I9 185 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-211ENST00000547950 ZNF431Q8TF32 576 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-211ENST00000547950 TMEM37Q8WXS4 190 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 C2orf50Q96LR7 162 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 MGST2Q99735 147 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 DNAJC4Q9NNZ3 241 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 NUDT15Q9NV35 164 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 NDUFA13Q9P0J0 144 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 RNF24Q9Y225 148 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 FAM240BA0A1B0GVZ2 78 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 LYRM9A8MSI8 78 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 H3BQ15 152 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 J3KRW8 73 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 MRPS12O15235 138 aaKnown RBP4.73□□□□□ -1.65
SCAF11-211ENST00000547950 RTL8CO15255 209 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 NUDT3O95989 172 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 PVALBP20472 110 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-211ENST00000547950 TSPOP30536 169 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 CDKN1BP46527 198 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 TAS2R60P59551 318 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 KIR3DS1Q14943 382 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 OPCMLQ14982 345 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 LGALS9BQ3B8N2 356 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 RNF212Q495C1 297 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 MIC13Q5XKP0 118 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 LCN15Q6UWW0 184 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 TMEM256Q8N2U0 113 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 OR10J6PQ8NGY7 276 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 ATG101Q9BSB4 218 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 PARD6GQ9BYG4 376 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-211ENST00000547950 ZNF331Q9NQX6 463 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-211ENST00000547950 UQCC1Q9NVA1 299 aa4.73□□□□□ -1.65
SCAF11-211ENST00000547950 KMT2AQ03164 3969 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 DNAH10Q8IVF4 4471 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 PLAC8L1A1L4L8 177 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 CBY3A6NI87 242 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 SLC17A3O00476 420 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 ATP5G1P05496 136 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 CXCL2P19875 107 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 S100A11P31949 105 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 ATP5G3P48201 142 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 BAXQ07812 192 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 RAB32Q13637 225 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 MZT2BQ6NZ67 158 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 TMEM252Q8N6L7 170 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 OR1L4Q8NGR5 311 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 C16orf74Q96GX8 76 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 SLC50A1Q9BRV3 221 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
SCAF11-211ENST00000547950 SLC39A9Q9NUM3 307 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 WDR83OSQ9Y284 106 aa4.72□□□□□ -1.65
SCAF11-211ENST00000547950 TIMM8BQ9Y5J9 83 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-211ENST00000547950 TRAV12-3A0A0B4J271 114 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 UBE2L5PA0A1B0GUS4 154 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 IGSF23A1L1A6 192 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 H7BYZ3 331 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 RGS13O14921 159 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 SIX6O95475 246 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 CT45A10P0DMU9 189 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 IGLC2P0DOY2 106 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 FGF7P21781 194 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 RPL29P47914 159 aaKnown RBP4.71□□□□□ -1.66
SCAF11-211ENST00000547950 SULT1A1P50225 295 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 OR5I1Q13606 314 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 GUK1Q16774 197 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 SOHLH1Q5JUK2 328 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 C1orf134Q5TEV5 83 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 GFI1BQ5VTD9 330 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 ZNF493Q6ZR52 646 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 Q6ZR54 194 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 STX12Q86Y82 276 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 CCDC28AQ8IWP9 274 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 C15orf53Q8NAA6 179 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 SAT2Q96F10 170 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-211ENST00000547950 CCDC32Q9BV29 185 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 C11orf1Q9H5F2 150 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 GPN1Q9HCN4 374 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-211ENST00000547950 ZNF586Q9NXT0 402 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 PXMP4Q9Y6I8 212 aa4.71□□□□□ -1.66
SCAF11-211ENST00000547950 A0A1B0GVY2 172 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 GAGE12BA1L429 117 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 GAGE7O76087 117 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 GAGE12FP0CL80 117 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 GAGE12GP0CL81 117 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 GAGE12IP0CL82 117 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 LEPP41159 167 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 CCL18P55774 89 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 HBG1P69891 147 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 HBG2P69892 147 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 NHLH2Q02577 135 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 ERCC8Q13216 396 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 IL15RAQ13261 267 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 CLINT1Q14677 625 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 ATP6V1FQ16864 119 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 VWC2Q2TAL6 325 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 RNASE8Q8TDE3 154 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 409.2 ms