RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TMUB2Q71RG4 321 aa10.55□□□□□ -0.72
DDX54-203ENST00000546869 SUN5Q8TC36 379 aa10.55□□□□□ -0.72
DDX54-203ENST00000546869 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
DDX54-203ENST00000546869 RARRES2Q99969 163 aa10.55□□□□□ -0.72
DDX54-203ENST00000546869 ACTR3CQ9C0K3 210 aaPredicted RBP10.55□□□□□ -0.72
DDX54-203ENST00000546869 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
DDX54-203ENST00000546869 TENM3Q9P273 2699 aa10.55□□□□□ -0.72
DDX54-203ENST00000546869 hCG_2014768A0A024R1R8 64 aa10.54□□□□□ -0.72
DDX54-203ENST00000546869 ZNF705FA8MVS1 300 aaPredicted RBP10.54□□□□□ -0.72
DDX54-203ENST00000546869 ZNF705EA8MWA4 302 aaPredicted RBP10.54□□□□□ -0.72
DDX54-203ENST00000546869 AMBPP02760 352 aa10.54□□□□□ -0.72
DDX54-203ENST00000546869 LGALSLQ3ZCW2 172 aaPredicted RBP10.54□□□□□ -0.72
DDX54-203ENST00000546869 ARL6IP6Q8N6S5 226 aa10.54□□□□□ -0.72
DDX54-203ENST00000546869 BLNKQ8WV28 456 aa10.54□□□□□ -0.72
DDX54-203ENST00000546869 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
DDX54-203ENST00000546869 AGRNO00468 2067 aa10.53□□□□□ -0.72
DDX54-203ENST00000546869 UBE2L3P68036 154 aaKnown RBP10.53□□□□□ -0.72
DDX54-203ENST00000546869 HIST1H1AQ02539 215 aaPredicted RBP10.53□□□□□ -0.72
DDX54-203ENST00000546869 BAP18Q8IXM2 172 aa10.53□□□□□ -0.72
DDX54-203ENST00000546869 OR10J6PQ8NGY7 276 aa10.53□□□□□ -0.72
DDX54-203ENST00000546869 STOML3Q8TAV4 291 aa10.53□□□□□ -0.72
DDX54-203ENST00000546869 ZNF471Q9BX82 626 aaPredicted RBP10.53□□□□□ -0.72
DDX54-203ENST00000546869 CTXND1A0A1B0GTU2 59 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 PRAC2D3DTV9 90 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 NPIPB6E9PJ23 425 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 PFDN1O60925 122 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 IGKV3-20P01619 116 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
DDX54-203ENST00000546869 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
DDX54-203ENST00000546869 ICAM4Q14773 271 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 AKR1C8PQ5T2L2 129 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 ZNF705AQ6ZN79 300 aaPredicted RBP10.52□□□□□ -0.73
DDX54-203ENST00000546869 EXOC3-AS1Q8N2X6 119 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 OR11H2Q8NH07 326 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 ODF3Q96PU9 254 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 NEU1Q99519 415 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 SLC35B3Q9H1N7 401 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 XCL2Q9UBD3 114 aa10.52□□□□□ -0.73
DDX54-203ENST00000546869 UMAD1C9J7I0 102 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 M0R3E3 92 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 CXorf1O96002 111 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 TPT1P13693 172 aaKnown RBP10.51□□□□□ -0.73
DDX54-203ENST00000546869 MIFP14174 115 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 RANP62826 216 aaKnown RBP10.51□□□□□ -0.73
DDX54-203ENST00000546869 RXFP4Q8TDU9 374 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 IGF2BP2-AS1Q96M15 143 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 Q9H3A6 140 aa10.51□□□□□ -0.73
DDX54-203ENST00000546869 RBAKDNA6NC62 111 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 SMIM9A6NGZ8 99 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 BOLA2-SMG1P6H3BVE0 249 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 CRXO43186 299 aaPredicted RBP10.5□□□□□ -0.73
DDX54-203ENST00000546869 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
DDX54-203ENST00000546869 ARL14EPLP0DKL9 152 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 FAM74A1Q5RGS3 127 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 DPPA3Q6W0C5 159 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 C11orf68Q9H3H3 251 aaKnown RBP10.5□□□□□ -0.73
DDX54-203ENST00000546869 OTORQ9NRC9 128 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 TMEM167BQ9NRX6 74 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 X6R8D5 127 aa10.5□□□□□ -0.73
DDX54-203ENST00000546869 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
DDX54-203ENST00000546869 EIF3GO75821 320 aaKnown RBP eCLIP10.49□□□□□ -0.73
DDX54-203ENST00000546869 GCHFRP30047 84 aa10.49□□□□□ -0.73
DDX54-203ENST00000546869 TSPOP30536 169 aa10.49□□□□□ -0.73
DDX54-203ENST00000546869 CDKN1BP46527 198 aa10.49□□□□□ -0.73
DDX54-203ENST00000546869 CSN1S1P47710 185 aa10.49□□□□□ -0.73
DDX54-203ENST00000546869 SSX7Q7RTT5 188 aa10.49□□□□□ -0.73
DDX54-203ENST00000546869 PPP1R14DQ9NXH3 145 aa10.49□□□□□ -0.73
DDX54-203ENST00000546869 PLA2G2EQ9NZK7 142 aa10.49□□□□□ -0.73
DDX54-203ENST00000546869 TRBV7-9A0A0J9YWB2 115 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 C3orf84H3BNL1 204 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 NMBP08949 121 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 CT45A10P0DMU9 189 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 FXYD7P58549 80 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 CD300CQ08708 224 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 ZFP69Q49AA0 526 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 EIF5AL1Q6IS14 154 aaKnown RBP10.48□□□□□ -0.73
DDX54-203ENST00000546869 SLC51BQ86UW2 128 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 Q8NAQ8 132 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 FAM19A4Q96LR4 140 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 C20orf144Q9BQM9 153 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 GOLT1BQ9Y3E0 138 aa10.48□□□□□ -0.73
DDX54-203ENST00000546869 A0A0J9YWU9 116 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 A0A1W2PRE2 83 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 PGPA6NDG6 321 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 M0R2Z0 102 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 INSP01308 110 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 TMEM256Q8N2U0 113 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 C9orf62Q8N4C0 152 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 MUC7Q8TAX7 377 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 TMED6Q8WW62 240 aa10.47□□□□□ -0.73
DDX54-203ENST00000546869 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms