RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MUC4Q99102 2169 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 A0A0J9YY99 117 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 GPR31O00270 319 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 LYRM1O43325 122 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 PIAS1O75925 651 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 GNG3P63215 75 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 POU6F1Q14863 301 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 FKBP1CQ5VVH2 108 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 LINC00299Q6ZSB3 139 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 LYG2Q86SG7 212 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 FAM216BQ8N7L0 139 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 PLEKHB2Q96CS7 222 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 CARD19Q96LW7 228 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 OR2H1Q9GZK4 316 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 ASH1LQ9NR48 2969 aaKnown RBP0.19□□□□□ -2.38
CCDC38-204ENST00000546816 RTL9Q8NET4 1388 aa0.19□□□□□ -2.38
CCDC38-204ENST00000546816 KCPQ6ZWJ8 1503 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 ZNF727A8MUV8 499 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 CST7O76096 145 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 RPL35P42766 123 aaKnown RBP0.18□□□□□ -2.38
CCDC38-204ENST00000546816 LTC4SQ16873 150 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 RTL8BQ17RB0 113 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 OCIAD2Q56VL3 154 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 TMED4Q7Z7H5 227 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 LINC00269Q8N2A0 174 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 SMIM20Q8N5G0 67 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 AP3S1Q92572 193 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 CST11Q9H112 138 aa0.18□□□□□ -2.38
CCDC38-204ENST00000546816 CHD3Q12873 2000 aaKnown RBP0.18□□□□□ -2.38
CCDC38-204ENST00000546816 A0A096LPI6 279 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 NUPR2A6NF83 97 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 A6NN06 94 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 CCL4P13236 92 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 PDE6GP18545 87 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 PPP1R2P41236 205 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 ZNF137PP52743 207 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 SPINK7P58062 85 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 NUP210LQ5VU65 1888 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 Q6ZQY7 126 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 Q6ZS92 163 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 ZCCHC23Q6ZST2 131 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 CCL4L1Q8NHW4 92 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 LIMD2Q9BT23 127 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 FAM103A1Q9BTL3 118 aaKnown RBP0.17□□□□□ -2.38
CCDC38-204ENST00000546816 OTORQ9NRC9 128 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 STOML2Q9UJZ1 356 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 UFC1Q9Y3C8 167 aa0.17□□□□□ -2.38
CCDC38-204ENST00000546816 GLRXP35754 106 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 SPINT3P49223 89 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 TAS2R41P59536 307 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 BASP1P80723 227 aaKnown RBP0.16□□□□□ -2.38
CCDC38-204ENST00000546816 DIAPH2-AS1Q14236 149 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 PRR15Q8IV56 129 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 PLAC4Q8WY50 150 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 DIRC1Q969H9 104 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 RMND5BQ96G75 393 aaPredicted RBP0.16□□□□□ -2.38
CCDC38-204ENST00000546816 CCL19Q99731 98 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 BOLA2Q9H3K6 86 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 TAF9BQ9HBM6 251 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 IL20Q9NYY1 176 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 JPT1Q9UK76 154 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 BOKQ9UMX3 212 aaPredicted RBP0.16□□□□□ -2.38
CCDC38-204ENST00000546816 PIK3C2AO00443 1686 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 N4BP2Q86UW6 1770 aaPredicted RBP0.16□□□□□ -2.38
CCDC38-204ENST00000546816 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
CCDC38-204ENST00000546816 KIAA1107Q9UPP5 1409 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 FANCMQ8IYD8 2048 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 NAV3Q8IVL0 2385 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 H3BQV1 296 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 IGHV3-30P01768 117 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 IGHV3-30-5P0DP03 117 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 TCTAP57738 103 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 RPL37AP61513 92 aaKnown RBP0.15□□□□□ -2.39
CCDC38-204ENST00000546816 MRPS36P82909 103 aaKnown RBP0.15□□□□□ -2.39
CCDC38-204ENST00000546816 C6orf52Q5T4I8 152 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 MCEEQ96PE7 176 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 LRTM1Q9HBL6 345 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 LAMTOR3Q9UHA4 124 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 TPRKBQ9Y3C4 175 aa0.15□□□□□ -2.39
CCDC38-204ENST00000546816 ADGBQ8N7X0 1667 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 TRAPPC8Q9Y2L5 1435 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 SYNE1Q8NF91 8797 aaKnown RBP0.14□□□□□ -2.39
CCDC38-204ENST00000546816 TMEM238C9JI98 176 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 KPNA4O00629 521 aaPredicted RBP0.14□□□□□ -2.39
CCDC38-204ENST00000546816 FXYD6P3P58550 94 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 VMA21Q3ZAQ7 101 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 C10orf111Q8N326 155 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 STX19Q8N4C7 294 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 CDC26Q8NHZ8 85 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 NEK7Q8TDX7 302 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 BORCS8Q96FH0 119 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 OR4C12Q96R67 309 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 HOPXQ9BPY8 73 aaPredicted RBP0.14□□□□□ -2.39
CCDC38-204ENST00000546816 EFCAB11Q9BUY7 163 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 NUBP2Q9Y5Y2 271 aa0.14□□□□□ -2.39
CCDC38-204ENST00000546816 YTHDC2Q9H6S0 1430 aaKnown RBP0.13□□□□□ -2.39
CCDC38-204ENST00000546816 MT-ND6P03923 174 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 FABP4P15090 132 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 CRYBA4P53673 196 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 C10orf99Q6UWK7 81 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms