RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 RARRES2Q99969 163 aa12.27□□□□□ -0.45
CCDC38-203ENST00000546803 ZNF471Q9BX82 626 aaPredicted RBP12.27□□□□□ -0.45
CCDC38-203ENST00000546803 DNAH9Q9NYC9 4486 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 ZNF705FA8MVS1 300 aaPredicted RBP12.26□□□□□ -0.45
CCDC38-203ENST00000546803 AMBPP02760 352 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 STAG3L2P0CL84 134 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 AMTNQ6UX39 209 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 CSNK1G2-AS1Q8NCQ2 148 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 OR10J6PQ8NGY7 276 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 OR11H2Q8NH07 326 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 EDA2RQ9HAV5 297 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 XCL2Q9UBD3 114 aa12.26□□□□□ -0.45
CCDC38-203ENST00000546803 A0A1B0GVG6 124 aa12.25□□□□□ -0.45
CCDC38-203ENST00000546803 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
CCDC38-203ENST00000546803 ZNF705DP0CH99 300 aaPredicted RBP12.25□□□□□ -0.45
CCDC38-203ENST00000546803 ZNF705BP0CI00 300 aaPredicted RBP12.25□□□□□ -0.45
CCDC38-203ENST00000546803 ICAM4Q14773 271 aa12.25□□□□□ -0.45
CCDC38-203ENST00000546803 EXOC3-AS1Q8N2X6 119 aa12.25□□□□□ -0.45
CCDC38-203ENST00000546803 SLC35B3Q9H1N7 401 aa12.25□□□□□ -0.45
CCDC38-203ENST00000546803 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
CCDC38-203ENST00000546803 M0R3E3 92 aa12.24□□□□□ -0.45
CCDC38-203ENST00000546803 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
CCDC38-203ENST00000546803 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC38-203ENST00000546803 FXYD7P58549 80 aa12.24□□□□□ -0.45
CCDC38-203ENST00000546803 RANP62826 216 aaKnown RBP12.24□□□□□ -0.45
CCDC38-203ENST00000546803 LGALSLQ3ZCW2 172 aaPredicted RBP12.24□□□□□ -0.45
CCDC38-203ENST00000546803 PHYHIPLQ96FC7 376 aa12.24□□□□□ -0.45
CCDC38-203ENST00000546803 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
CCDC38-203ENST00000546803 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
CCDC38-203ENST00000546803 ZNF705EA8MWA4 302 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-203ENST00000546803 BOLA2-SMG1P6H3BVE0 249 aa12.23□□□□□ -0.45
CCDC38-203ENST00000546803 CXorf1O96002 111 aa12.23□□□□□ -0.45
CCDC38-203ENST00000546803 ARL14EPLP0DKL9 152 aa12.23□□□□□ -0.45
CCDC38-203ENST00000546803 TPT1P13693 172 aaKnown RBP12.23□□□□□ -0.45
CCDC38-203ENST00000546803 CSN1S1P47710 185 aa12.23□□□□□ -0.45
CCDC38-203ENST00000546803 BAP18Q8IXM2 172 aa12.23□□□□□ -0.45
CCDC38-203ENST00000546803 Q9H3A6 140 aa12.23□□□□□ -0.45
CCDC38-203ENST00000546803 UMAD1C9J7I0 102 aa12.22□□□□□ -0.45
CCDC38-203ENST00000546803 GCHFRP30047 84 aa12.22□□□□□ -0.45
CCDC38-203ENST00000546803 STOML3Q8TAV4 291 aa12.22□□□□□ -0.45
CCDC38-203ENST00000546803 SUN5Q8TC36 379 aa12.22□□□□□ -0.45
CCDC38-203ENST00000546803 IGF2BP2-AS1Q96M15 143 aa12.22□□□□□ -0.45
CCDC38-203ENST00000546803 OTORQ9NRC9 128 aa12.22□□□□□ -0.45
CCDC38-203ENST00000546803 TMEM167BQ9NRX6 74 aa12.22□□□□□ -0.45
CCDC38-203ENST00000546803 TGP01266 2768 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 NPIPB6E9PJ23 425 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 TSPOP30536 169 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 SPINK13Q1W4C9 94 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 ZFP69Q49AA0 526 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 FAM74A1Q5RGS3 127 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 RXFP4Q8TDU9 374 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 LINC00477Q96M19 166 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 ODF3Q96PU9 254 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.45
CCDC38-203ENST00000546803 M0R2Z0 102 aa12.2□□□□□ -0.46
CCDC38-203ENST00000546803 PRB4P10163 310 aaPredicted RBP12.2□□□□□ -0.46
CCDC38-203ENST00000546803 MIFP14174 115 aa12.2□□□□□ -0.46
CCDC38-203ENST00000546803 CD300CQ08708 224 aa12.2□□□□□ -0.46
CCDC38-203ENST00000546803 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
CCDC38-203ENST00000546803 EIF5AL1Q6IS14 154 aaKnown RBP12.2□□□□□ -0.46
CCDC38-203ENST00000546803 ZNF705AQ6ZN79 300 aaPredicted RBP12.2□□□□□ -0.46
CCDC38-203ENST00000546803 NEU1Q99519 415 aa12.2□□□□□ -0.46
CCDC38-203ENST00000546803 X6R8D5 127 aa12.2□□□□□ -0.46
CCDC38-203ENST00000546803 A0A0J9YWU9 116 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 PGPA6NDG6 321 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 INSP01308 110 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 CDKN1BP46527 198 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 C9orf47Q6ZRZ4 202 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 CMTM2Q8TAZ6 248 aa12.19□□□□□ -0.46
CCDC38-203ENST00000546803 C11orf68Q9H3H3 251 aaKnown RBP12.19□□□□□ -0.46
CCDC38-203ENST00000546803 RBAKDNA6NC62 111 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 CRXO43186 299 aaPredicted RBP12.18□□□□□ -0.46
CCDC38-203ENST00000546803 SLC25A5P05141 298 aaKnown RBP12.18□□□□□ -0.46
CCDC38-203ENST00000546803 CT45A10P0DMU9 189 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 LEPP41159 167 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 SLC51BQ86UW2 128 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 Q8NAQ8 132 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 MUC7Q8TAX7 377 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 TMED6Q8WW62 240 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
CCDC38-203ENST00000546803 HUWE1Q7Z6Z7 4374 aaKnown RBP12.18□□□□□ -0.46
CCDC38-203ENST00000546803 AGRNO00468 2067 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 IGHV3OR16-12A0A075B7B8 117 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 IGKV2-40A0A087WW87 121 aaPredicted RBP12.17□□□□□ -0.46
CCDC38-203ENST00000546803 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 IGKV2D-40P01614 121 aaPredicted RBP12.17□□□□□ -0.46
CCDC38-203ENST00000546803 TMEM78Q5T7P6 136 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 IQCF2Q8IXL9 164 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 C9orf62Q8N4C0 152 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 PLA2G2EQ9NZK7 142 aa12.17□□□□□ -0.46
CCDC38-203ENST00000546803 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
CCDC38-203ENST00000546803 A0A1W2PRE2 83 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms