RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 KLK5Q9Y337 293 aaPredicted RBP8.55□□□□□ -1.04
YBX3-217ENST00000546164 TMEM189A5PLL7 270 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 H3BTX0 84 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 CRXO43186 299 aaPredicted RBP8.54□□□□□ -1.04
YBX3-217ENST00000546164 MIR17HGQ75NE6 70 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 SCGB1C1Q8TD33 95 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
YBX3-217ENST00000546164 AQP10Q96PS8 301 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 SLC25A2Q9BXI2 301 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 WFDC1Q9HC57 220 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 RFNGQ9Y644 331 aa8.54□□□□□ -1.04
YBX3-217ENST00000546164 M0R2Z0 102 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 NDUFB4O95168 129 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 INSP01308 110 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 PYYP10082 97 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 SPINK13Q1W4C9 94 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 XP32Q5T750 250 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 FUT9Q9Y231 359 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
YBX3-217ENST00000546164 IGHV3OR16-12A0A075B7B8 117 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 C11orf94C9JXX5 98 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 PRAC2D3DTV9 90 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 HBE1P02100 147 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 RHOBP62745 196 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 ZNF266Q14584 549 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 Q5BKY6 102 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 FFAR4Q5NUL3 377 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 OR10J6PQ8NGY7 276 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 OR51M1Q9H341 326 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 CELA1Q9UNI1 258 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 TIMM9Q9Y5J7 89 aa8.52□□□□□ -1.05
YBX3-217ENST00000546164 TEX48A0A1B0GUV7 120 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 NPIPB6E9PJ23 425 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 NBEAP1P0C6P0 100 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 CDKN1BP46527 198 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 TCTAP57738 103 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 RRN3P1Q2M238 152 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 BAP18Q8IXM2 172 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 TMEM256Q8N2U0 113 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 LINC00476Q8WZB0 136 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 FXYD5Q96DB9 178 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
YBX3-217ENST00000546164 TRAV10A0A0B4J240 114 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 LOC102723971A0A1B0GUV8 181 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 M0R3E3 92 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 SPART-AS1P0CW21 52 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 TSPOP30536 169 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 C12orf74Q32Q52 190 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 Q6ZTC4 211 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 OR2T35Q8NGX2 323 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 OR2G3Q8NGZ4 309 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 C2CD4CQ8TF44 421 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 RNF141Q8WVD5 230 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 ZNF503Q96F45 646 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 C20orf144Q9BQM9 153 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 TMEM208Q9BTX3 173 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 PAXXQ9BUH6 204 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 AAMDCQ9H7C9 122 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
YBX3-217ENST00000546164 TRAV12-2A0A075B6T6 113 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 RNF222A6NCQ9 220 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 G3V3Q6 166 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 CT45A10P0DMU9 189 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
YBX3-217ENST00000546164 M6PRP20645 277 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 TAS2R45P59539 299 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 ACOT6Q3I5F7 207 aaPredicted RBP8.49□□□□□ -1.05
YBX3-217ENST00000546164 KHDC3LQ587J8 217 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 RPP25LQ8N5L8 163 aaKnown RBP8.49□□□□□ -1.05
YBX3-217ENST00000546164 INO80EQ8NBZ0 244 aaPredicted RBP8.49□□□□□ -1.05
YBX3-217ENST00000546164 BLNKQ8WV28 456 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 PSMG3Q9BT73 122 aaPredicted RBP8.49□□□□□ -1.05
YBX3-217ENST00000546164 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 TNFSF18Q9UNG2 199 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 KMT2AQ03164 3969 aa8.49□□□□□ -1.05
YBX3-217ENST00000546164 OR7C2O60412 319 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 OR10J4P0C629 311 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 EMP1P54849 157 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 TAS2R60P59551 318 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 UBE2L3P68036 154 aaKnown RBP8.48□□□□□ -1.05
YBX3-217ENST00000546164 ICAM4Q14773 271 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 LYPD1Q8N2G4 141 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 EXOC3-AS1Q8N2X6 119 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 PHYHIPLQ96FC7 376 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 LINC00477Q96M19 166 aa8.48□□□□□ -1.05
YBX3-217ENST00000546164 YTHDF2Q9Y5A9 579 aaKnown RBP8.48□□□□□ -1.05
YBX3-217ENST00000546164 FXYD6-FXYD2A0A087WZ82 144 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 ZNF705GA8MUZ8 300 aaPredicted RBP8.47□□□□□ -1.05
YBX3-217ENST00000546164 H7BYZ3 331 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 ATP6V0CP27449 155 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 LEPP41159 167 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 RAB2AP61019 212 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 SERF2P84101 59 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 KIR3DS1Q14943 382 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 GFI1BQ5VTD9 330 aa8.47□□□□□ -1.05
YBX3-217ENST00000546164 PQLC2Q6ZP29 291 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms