RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 GDF5OSQ5U4N7 250 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 TMUB2Q71RG4 321 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 RXFP4Q8TDU9 374 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 ST6GAL2Q96JF0 529 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 FAM167A-AS1Q96KT0 104 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 SH3BGRL3Q9H299 93 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 DNAH3Q8TD57 4116 aa12.81□□□□□ -0.36
CD9-211ENST00000546073 SLC17A3O00476 420 aa12.81□□□□□ -0.36
CD9-211ENST00000546073 C1QBP02746 253 aa12.81□□□□□ -0.36
CD9-211ENST00000546073 FXYD7P58549 80 aa12.81□□□□□ -0.36
CD9-211ENST00000546073 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
CD9-211ENST00000546073 TMEM167BQ9NRX6 74 aa12.81□□□□□ -0.36
CD9-211ENST00000546073 UMAD1C9J7I0 102 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 BOLA2-SMG1P6H3BVE0 249 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 INSP01308 110 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 MIFP14174 115 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 HLA-DMBP28068 263 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 DEFB1P60022 68 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 ZFP69Q49AA0 526 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 TMEM78Q5T7P6 136 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 OR11H4Q8NGC9 324 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 FXYD5Q96DB9 178 aa12.8□□□□□ -0.36
CD9-211ENST00000546073 IGHV3OR16-12A0A075B7B8 117 aa12.79□□□□□ -0.36
CD9-211ENST00000546073 CTXND1A0A1B0GTU2 59 aa12.79□□□□□ -0.36
CD9-211ENST00000546073 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
CD9-211ENST00000546073 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
CD9-211ENST00000546073 SEC11BP0C7V7 166 aa12.79□□□□□ -0.36
CD9-211ENST00000546073 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
CD9-211ENST00000546073 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
CD9-211ENST00000546073 LEPP41159 167 aa12.79□□□□□ -0.36
CD9-211ENST00000546073 EXOC3-AS1Q8N2X6 119 aa12.79□□□□□ -0.36
CD9-211ENST00000546073 RPP25LQ8N5L8 163 aaKnown RBP12.79□□□□□ -0.36
CD9-211ENST00000546073 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
CD9-211ENST00000546073 RFNGQ9Y644 331 aa12.79□□□□□ -0.36
CD9-211ENST00000546073 SMIM9A6NGZ8 99 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 K7EQM0 130 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 STAG3L2P0CL84 134 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 BAP18Q8IXM2 172 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 IGF2BP2-AS1Q96M15 143 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 SLC35B3Q9H1N7 401 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 Q9H3A6 140 aa12.78□□□□□ -0.36
CD9-211ENST00000546073 TEX46H3BTG2 121 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 NDUFB4O95168 129 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 HBE1P02100 147 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 CDKN1BP46527 198 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 SPINK13Q1W4C9 94 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 CYTL1Q9NRR1 136 aa12.77□□□□□ -0.37
CD9-211ENST00000546073 A0A0J9YWU9 116 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 TMEM189A5PLL7 270 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 PGPA6NDG6 321 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 C3orf84H3BNL1 204 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 GCHFRP30047 84 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 DPPA3Q6W0C5 159 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 MUC7Q8TAX7 377 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 PHYHIPLQ96FC7 376 aa12.76□□□□□ -0.37
CD9-211ENST00000546073 M0R3E3 92 aa12.75□□□□□ -0.37
CD9-211ENST00000546073 TGP01266 2768 aa12.75□□□□□ -0.37
CD9-211ENST00000546073 TMEM256Q8N2U0 113 aa12.75□□□□□ -0.37
CD9-211ENST00000546073 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
CD9-211ENST00000546073 NPIPB6E9PJ23 425 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 M0R2Z0 102 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 RAB5CP51148 216 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 RRN3P1Q2M238 152 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 SLC51BQ86UW2 128 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 ARL6IP6Q8N6S5 226 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 LINC01587Q99440 93 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
CD9-211ENST00000546073 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 A8MTW9 85 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 ZNF705EA8MWA4 302 aaPredicted RBP12.73□□□□□ -0.37
CD9-211ENST00000546073 EIF3GO75821 320 aaKnown RBP eCLIP12.73□□□□□ -0.37
CD9-211ENST00000546073 SLC25A5P05141 298 aaKnown RBP12.73□□□□□ -0.37
CD9-211ENST00000546073 GIG44P09565 113 aaPredicted RBP12.73□□□□□ -0.37
CD9-211ENST00000546073 CCDC28AQ8IWP9 274 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 CSNK1G2-AS1Q8NCQ2 148 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 FAM213BQ8TBF2 198 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 ZNF503Q96F45 646 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 NEU1Q99519 415 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 NIPSNAP3BQ9BS92 247 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 C11orf68Q9H3H3 251 aaKnown RBP12.73□□□□□ -0.37
CD9-211ENST00000546073 EDA2RQ9HAV5 297 aa12.73□□□□□ -0.37
CD9-211ENST00000546073 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
CD9-211ENST00000546073 TEX48A0A1B0GUV7 120 aa12.72□□□□□ -0.37
CD9-211ENST00000546073 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
CD9-211ENST00000546073 GPX1P07203 203 aa12.72□□□□□ -0.37
CD9-211ENST00000546073 LGALSLQ3ZCW2 172 aaPredicted RBP12.72□□□□□ -0.37
CD9-211ENST00000546073 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
CD9-211ENST00000546073 C11orf45Q8TAV5 145 aa12.72□□□□□ -0.37
CD9-211ENST00000546073 NDFIP1Q9BT67 221 aa12.72□□□□□ -0.37
CD9-211ENST00000546073 TRAV12-2A0A075B6T6 113 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 CXorf65A6NEN9 183 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 F6UZH7 168 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms