RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 C4BPBP20851 252 aa12.01□□□□□ -0.49
LIMS2-217ENST00000545738 GUK1Q16774 197 aa12.01□□□□□ -0.49
LIMS2-217ENST00000545738 TOR2AQ5JU69 321 aa12.01□□□□□ -0.49
LIMS2-217ENST00000545738 ZNF253O75346 499 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 RANP62826 216 aaKnown RBP12□□□□□ -0.49
LIMS2-217ENST00000545738 PDE6HQ13956 83 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 PSG3Q16557 428 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 ACTL10Q5JWF8 245 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 SLC50A1Q9BRV3 221 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 A8MZ25 164 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 CXorf1O96002 111 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 ID1P41134 155 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 DEFB121Q5J5C9 76 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
LIMS2-217ENST00000545738 BTF3P20290 206 aaKnown RBP11.99□□□□□ -0.49
LIMS2-217ENST00000545738 SSTP61278 116 aa11.99□□□□□ -0.49
LIMS2-217ENST00000545738 CCL20P78556 96 aa11.99□□□□□ -0.49
LIMS2-217ENST00000545738 ICAM4Q14773 271 aa11.99□□□□□ -0.49
LIMS2-217ENST00000545738 SFT2D1Q8WV19 159 aa11.99□□□□□ -0.49
LIMS2-217ENST00000545738 Q9H3A6 140 aa11.99□□□□□ -0.49
LIMS2-217ENST00000545738 SAV1Q9H4B6 383 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-217ENST00000545738 TGP01266 2768 aa11.98□□□□□ -0.49
LIMS2-217ENST00000545738 H3BMM0 161 aa11.98□□□□□ -0.49
LIMS2-217ENST00000545738 RPL35AP18077 110 aaKnown RBP11.98□□□□□ -0.49
LIMS2-217ENST00000545738 EIF5AL1Q6IS14 154 aaKnown RBP11.98□□□□□ -0.49
LIMS2-217ENST00000545738 DPPA3Q6W0C5 159 aa11.98□□□□□ -0.49
LIMS2-217ENST00000545738 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
LIMS2-217ENST00000545738 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
LIMS2-217ENST00000545738 A0A0J9YX75 114 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 GGTLC3B5MD39 225 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 HLA-DRB4P13762 266 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 SAMD13Q5VXD3 122 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 TRPT1Q86TN4 253 aaKnown RBP11.97□□□□□ -0.49
LIMS2-217ENST00000545738 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
LIMS2-217ENST00000545738 HLA-DRB4X5D2U9 266 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 GIG44P09565 113 aaPredicted RBP11.97□□□□□ -0.49
LIMS2-217ENST00000545738 H2AFB1P0C5Y9 115 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 RAB5CP51148 216 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 TEX261Q6UWH6 196 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 FOXI2Q6ZQN5 318 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 TUBA4BQ9H853 241 aa11.97□□□□□ -0.49
LIMS2-217ENST00000545738 IGKV3-20P01619 116 aa11.96□□□□□ -0.49
LIMS2-217ENST00000545738 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-217ENST00000545738 UBE2G2P60604 165 aa11.96□□□□□ -0.49
LIMS2-217ENST00000545738 PSG9Q00887 426 aa11.96□□□□□ -0.49
LIMS2-217ENST00000545738 SBSPONQ8IVN8 264 aa11.96□□□□□ -0.49
LIMS2-217ENST00000545738 PCNPQ8WW12 178 aaKnown RBP11.96□□□□□ -0.49
LIMS2-217ENST00000545738 ZNF705EA8MWA4 302 aaPredicted RBP11.95□□□□□ -0.5
LIMS2-217ENST00000545738 CNN1P51911 297 aaKnown RBP11.95□□□□□ -0.5
LIMS2-217ENST00000545738 OR8A1Q8NGG7 326 aa11.95□□□□□ -0.5
LIMS2-217ENST00000545738 TMEM167BQ9NRX6 74 aa11.95□□□□□ -0.5
LIMS2-217ENST00000545738 IGKV2-40A0A087WW87 121 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-217ENST00000545738 PGPA6NDG6 321 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 IGKV2D-40P01614 121 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-217ENST00000545738 GNG5P63218 68 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 HAGHQ16775 308 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 AMTNQ6UX39 209 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 STHQ8IWL8 128 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 ARL6IP6Q8N6S5 226 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 ZNF680Q8NEM1 530 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 ASCL2Q99929 193 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 LOC102724200A0A096LPH7 203 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-217ENST00000545738 A8MTW9 85 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-217ENST00000545738 ERCC8Q13216 396 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 LYPD1Q8N2G4 141 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 MRPL53Q96EL3 112 aaKnown RBP11.94□□□□□ -0.5
LIMS2-217ENST00000545738 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 OTORQ9NRC9 128 aa11.94□□□□□ -0.5
LIMS2-217ENST00000545738 TRAV1-1A0A0B4J248 108 aa11.93□□□□□ -0.5
LIMS2-217ENST00000545738 PCP4L1A6NKN8 68 aa11.93□□□□□ -0.5
LIMS2-217ENST00000545738 HIST1H1AQ02539 215 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-217ENST00000545738 OR4B1Q8NGF8 309 aa11.93□□□□□ -0.5
LIMS2-217ENST00000545738 VGLL1Q99990 258 aa11.93□□□□□ -0.5
LIMS2-217ENST00000545738 SLC35B3Q9H1N7 401 aa11.93□□□□□ -0.5
LIMS2-217ENST00000545738 SNAPINO95295 136 aa11.92□□□□□ -0.5
LIMS2-217ENST00000545738 ATP5G3P48201 142 aa11.92□□□□□ -0.5
LIMS2-217ENST00000545738 FXYD7P58549 80 aa11.92□□□□□ -0.5
LIMS2-217ENST00000545738 SUMO1P63165 101 aaKnown RBP11.92□□□□□ -0.5
LIMS2-217ENST00000545738 A0A1W2PRE2 83 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 PAGE4O60829 102 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 KIR3DS1Q14943 382 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 LYPD6BQ8NI32 183 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 RETNQ9HD89 108 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 CLEC5AQ9NY25 188 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 GATCO43716 136 aaKnown RBP11.91□□□□□ -0.5
LIMS2-217ENST00000545738 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
LIMS2-217ENST00000545738 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
LIMS2-217ENST00000545738 NPIPB6E9PJ23 425 aa11.9□□□□□ -0.5
LIMS2-217ENST00000545738 CT45A10P0DMU9 189 aa11.9□□□□□ -0.5
LIMS2-217ENST00000545738 AGPAT4-IT1Q9H0P7 198 aa11.9□□□□□ -0.5
LIMS2-217ENST00000545738 PPP1R14DQ9NXH3 145 aa11.9□□□□□ -0.5
LIMS2-217ENST00000545738 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
LIMS2-217ENST00000545738 M0R2Z0 102 aa11.89□□□□□ -0.51
LIMS2-217ENST00000545738 SLC25A5P05141 298 aaKnown RBP11.89□□□□□ -0.51
LIMS2-217ENST00000545738 Q8TAT8 98 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms