RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 H3BQ15 152 aa14.05□□□□□ -0.16
CHD4-213ENST00000545584 H7BYZ3 331 aa14.05□□□□□ -0.16
CHD4-213ENST00000545584 FGF7P21781 194 aa14.05□□□□□ -0.16
CHD4-213ENST00000545584 ZNF493Q6ZR52 646 aa14.05□□□□□ -0.16
CHD4-213ENST00000545584 SAT2Q96F10 170 aaPredicted RBP14.05□□□□□ -0.16
CHD4-213ENST00000545584 TIMM8BQ9Y5J9 83 aaPredicted RBP14.05□□□□□ -0.16
CHD4-213ENST00000545584 DNAH10Q8IVF4 4471 aa14.05□□□□□ -0.16
CHD4-213ENST00000545584 IGLV2-18A0A075B6J9 118 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 PLAC8L1A1L4L8 177 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 F5H768 121 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 MPDU1O75352 247 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 ATP5G1P05496 136 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 ATP5G3P48201 142 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 FCN2Q15485 313 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 CHAC2Q8WUX2 184 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 DNAH6Q9C0G6 4158 aa14.04□□□□□ -0.16
CHD4-213ENST00000545584 CBY3A6NI87 242 aa14.03□□□□□ -0.16
CHD4-213ENST00000545584 PRAC2D3DTV9 90 aa14.03□□□□□ -0.16
CHD4-213ENST00000545584 RLN2P04090 185 aa14.03□□□□□ -0.16
CHD4-213ENST00000545584 CCDC28AQ8IWP9 274 aa14.03□□□□□ -0.16
CHD4-213ENST00000545584 TMEM263Q8WUH6 116 aaKnown RBP14.03□□□□□ -0.16
CHD4-213ENST00000545584 ATG101Q9BSB4 218 aa14.03□□□□□ -0.16
CHD4-213ENST00000545584 ZNF253O75346 499 aa14.02□□□□□ -0.17
CHD4-213ENST00000545584 LEPP41159 167 aa14.02□□□□□ -0.17
CHD4-213ENST00000545584 PARD6GQ9BYG4 376 aaPredicted RBP14.02□□□□□ -0.17
CHD4-213ENST00000545584 SLC25A31Q9H0C2 315 aa14.02□□□□□ -0.17
CHD4-213ENST00000545584 ZNF586Q9NXT0 402 aa14.02□□□□□ -0.17
CHD4-213ENST00000545584 PRSS29PA6NIE9 313 aa14.01□□□□□ -0.17
CHD4-213ENST00000545584 UPK1BO75841 260 aa14.01□□□□□ -0.17
CHD4-213ENST00000545584 FAM3BP58499 235 aaPredicted RBP14.01□□□□□ -0.17
CHD4-213ENST00000545584 GFI1BQ5VTD9 330 aa14.01□□□□□ -0.17
CHD4-213ENST00000545584 RNASE8Q8TDE3 154 aaKnown RBP14.01□□□□□ -0.17
CHD4-213ENST00000545584 ODF3Q96PU9 254 aa14.01□□□□□ -0.17
CHD4-213ENST00000545584 NOP10Q9NPE3 64 aaKnown RBP14.01□□□□□ -0.17
CHD4-213ENST00000545584 PTTG2Q9NZH5 202 aa14.01□□□□□ -0.17
CHD4-213ENST00000545584 KIR3DS1Q14943 382 aa14□□□□□ -0.17
CHD4-213ENST00000545584 SOHLH1Q5JUK2 328 aa14□□□□□ -0.17
CHD4-213ENST00000545584 MRPL53Q96EL3 112 aaKnown RBP14□□□□□ -0.17
CHD4-213ENST00000545584 NPCDR1Q9BY65 106 aa14□□□□□ -0.17
CHD4-213ENST00000545584 TMEM14CQ9P0S9 112 aa14□□□□□ -0.17
CHD4-213ENST00000545584 TIMM9Q9Y5J7 89 aa14□□□□□ -0.17
CHD4-213ENST00000545584 TRBV19A0A075B6N1 114 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 E5RGE8 158 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 NPIPB6E9PJ23 425 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 J3KRW8 73 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 RTL8CO15255 209 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 PRAF2O60831 178 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 NUDT3O95989 172 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 HIST1H1EP10412 219 aaKnown RBP13.99□□□□□ -0.17
CHD4-213ENST00000545584 CYCSP99999 105 aaKnown RBP13.99□□□□□ -0.17
CHD4-213ENST00000545584 NMES1Q9C002 83 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 PRELID1Q9Y255 219 aa13.99□□□□□ -0.17
CHD4-213ENST00000545584 SIX6O95475 246 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 CT45A10P0DMU9 189 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 IFITM3Q01628 133 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 NHLH2Q02577 135 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 PDE6HQ13956 83 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 LRRC37A5PQ49AS3 106 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 Q6ZR54 194 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 OR5C1Q8NGR4 320 aa13.98□□□□□ -0.17
CHD4-213ENST00000545584 TRAV12-3A0A0B4J271 114 aa13.97□□□□□ -0.17
CHD4-213ENST00000545584 SNURFLB1AK76 121 aa13.97□□□□□ -0.17
CHD4-213ENST00000545584 INMT-MINDY4F8WBC2 141 aa13.97□□□□□ -0.17
CHD4-213ENST00000545584 THAP6Q8TBB0 222 aa13.97□□□□□ -0.17
CHD4-213ENST00000545584 AAMDCQ9H7C9 122 aa13.97□□□□□ -0.17
CHD4-213ENST00000545584 KCNIP2Q9NS61 270 aa13.97□□□□□ -0.17
CHD4-213ENST00000545584 M0R3E3 92 aa13.96□□□□□ -0.17
CHD4-213ENST00000545584 PYYP10082 97 aa13.96□□□□□ -0.17
CHD4-213ENST00000545584 CCL18P55774 89 aa13.96□□□□□ -0.17
CHD4-213ENST00000545584 BLNKQ8WV28 456 aa13.96□□□□□ -0.17
CHD4-213ENST00000545584 PYGO2Q9BRQ0 406 aa13.96□□□□□ -0.17
CHD4-213ENST00000545584 NACAE9PAV3 2078 aa13.95□□□□□ -0.18
CHD4-213ENST00000545584 A0A1B0GVY2 172 aa13.95□□□□□ -0.18
CHD4-213ENST00000545584 SLC25A5P05141 298 aaKnown RBP13.95□□□□□ -0.18
CHD4-213ENST00000545584 CLINT1Q14677 625 aa13.95□□□□□ -0.18
CHD4-213ENST00000545584 GCSAMLQ5JQS6 135 aa13.95□□□□□ -0.18
CHD4-213ENST00000545584 LINC00477Q96M19 166 aa13.95□□□□□ -0.18
CHD4-213ENST00000545584 OR5AC2Q9NZP5 309 aa13.95□□□□□ -0.18
CHD4-213ENST00000545584 NDUFB4O95168 129 aa13.94□□□□□ -0.18
CHD4-213ENST00000545584 OR5I1Q13606 314 aa13.94□□□□□ -0.18
CHD4-213ENST00000545584 C1orf134Q5TEV5 83 aa13.94□□□□□ -0.18
CHD4-213ENST00000545584 GAGE12BA1L429 117 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 C7orf71A4D174 169 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 C17orf112F2Z3M2 114 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 GAGE7O76087 117 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 GAGE12FP0CL80 117 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 GAGE12GP0CL81 117 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 GAGE12IP0CL82 117 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 ERCC8Q13216 396 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 EXOC3-AS1Q8N2X6 119 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 RNF141Q8WVD5 230 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 SLC25A2Q9BXI2 301 aa13.93□□□□□ -0.18
CHD4-213ENST00000545584 MRPL32Q9BYC8 188 aaKnown RBP13.93□□□□□ -0.18
CHD4-213ENST00000545584 DEFA1P59665 94 aa13.92□□□□□ -0.18
CHD4-213ENST00000545584 DEFA3P59666 94 aa13.92□□□□□ -0.18
CHD4-213ENST00000545584 ICAM4Q14773 271 aa13.92□□□□□ -0.18
CHD4-213ENST00000545584 MIR17HGQ75NE6 70 aa13.92□□□□□ -0.18
CHD4-213ENST00000545584 LINC00612Q8N6U2 182 aa13.92□□□□□ -0.18
CHD4-213ENST00000545584 GNPNAT1Q96EK6 184 aaPredicted RBP13.92□□□□□ -0.18
CHD4-213ENST00000545584 WDR61Q9GZS3 305 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms