RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 MORN5Q5VZ52 161 aa8.49□□□□□ -1.05
HDAC4-216ENST00000544989 Q6ZTC4 211 aa8.49□□□□□ -1.05
HDAC4-216ENST00000544989 C1orf158Q8N1D5 194 aa8.49□□□□□ -1.05
HDAC4-216ENST00000544989 SAT2Q96F10 170 aaPredicted RBP8.49□□□□□ -1.05
HDAC4-216ENST00000544989 RNF126Q9BV68 326 aa8.49□□□□□ -1.05
HDAC4-216ENST00000544989 PARD6GQ9BYG4 376 aaPredicted RBP8.49□□□□□ -1.05
HDAC4-216ENST00000544989 MED28Q9H204 178 aa8.49□□□□□ -1.05
HDAC4-216ENST00000544989 TIMM9Q9Y5J7 89 aa8.49□□□□□ -1.05
HDAC4-216ENST00000544989 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 H3BQ15 152 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 M0R2Z0 102 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 C12orf74Q32Q52 190 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 FAM210BQ96KR6 192 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 ODF3Q96PU9 254 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 AAMDCQ9H7C9 122 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 MBD2Q9UBB5 411 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 ALG5Q9Y673 324 aa8.48□□□□□ -1.05
HDAC4-216ENST00000544989 KIAA1109Q2LD37 5005 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 DEFB131BA0A096LNP1 70 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 IGLL5B9A064 214 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 SLC17A3O00476 420 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 CRXO43186 299 aaPredicted RBP8.47□□□□□ -1.05
HDAC4-216ENST00000544989 EMP1P54849 157 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 TAS2R60P59551 318 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 NIPSNAP3BQ9BS92 247 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 ZNF586Q9NXT0 402 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 DKK2Q9UBU2 259 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 CELA1Q9UNI1 258 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 FUT9Q9Y231 359 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
HDAC4-216ENST00000544989 LYRM9A8MSI8 78 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 H7BYZ3 331 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 LEPP41159 167 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 TAS2R45P59539 299 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 FAM222AQ5U5X8 452 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 ZNF493Q6ZR52 646 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 BAP18Q8IXM2 172 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 LINC01587Q99440 93 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 OR51M1Q9H341 326 aa8.46□□□□□ -1.06
HDAC4-216ENST00000544989 YTHDF2Q9Y5A9 579 aaKnown RBP8.46□□□□□ -1.06
HDAC4-216ENST00000544989 IGHV4-4A0A075B6R2 117 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 TRAV12-2A0A075B6T6 113 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 NPIPB6E9PJ23 425 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 H3BTX0 84 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 SNRPCP09234 159 aaKnown RBP8.45□□□□□ -1.06
HDAC4-216ENST00000544989 DAD1P61803 113 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 ZNF266Q14584 549 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 KHDC3LQ587J8 217 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 GCSAMLQ5JQS6 135 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 LYPD1Q8N2G4 141 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 RPP25LQ8N5L8 163 aaKnown RBP8.45□□□□□ -1.06
HDAC4-216ENST00000544989 C16orf74Q96GX8 76 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 LINC00477Q96M19 166 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 NDUFAF3Q9BU61 184 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 PAXXQ9BUH6 204 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 SLC25A2Q9BXI2 301 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 APLNQ9ULZ1 77 aa8.45□□□□□ -1.06
HDAC4-216ENST00000544989 GIPP09681 153 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-216ENST00000544989 NBEAP1P0C6P0 100 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 PYYP10082 97 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 RGS21Q2M5E4 152 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 ACOT6Q3I5F7 207 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-216ENST00000544989 FFAR4Q5NUL3 377 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 MIR17HGQ75NE6 70 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 CCDC28AQ8IWP9 274 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 BLNKQ8WV28 456 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 FAM167A-AS1Q96KT0 104 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 SMIM3Q9BZL3 60 aa8.44□□□□□ -1.06
HDAC4-216ENST00000544989 ZNF705GA8MUZ8 300 aaPredicted RBP8.43□□□□□ -1.06
HDAC4-216ENST00000544989 OR7C2O60412 319 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 NDUFB4O95168 129 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 NMBP08949 121 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 M6PRP20645 277 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 CSN1S1P47710 185 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 FCN2Q15485 313 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 TMEM263Q8WUH6 116 aaKnown RBP8.43□□□□□ -1.06
HDAC4-216ENST00000544989 RNF141Q8WVD5 230 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 AQP10Q96PS8 301 aa8.43□□□□□ -1.06
HDAC4-216ENST00000544989 TRBV7-9A0A0J9YWB2 115 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 A0A1W2PPV4 95 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 PRAC2D3DTV9 90 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 SLC25A5P05141 298 aaKnown RBP8.42□□□□□ -1.06
HDAC4-216ENST00000544989 P0DMU3 169 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 FAM231AP0DMU4 169 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 FAM231CP0DMU5 169 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 PQLC2Q6ZP29 291 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 ZNF767PQ75MW2 155 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 INO80EQ8NBZ0 244 aaPredicted RBP8.42□□□□□ -1.06
HDAC4-216ENST00000544989 FXYD5Q96DB9 178 aa8.42□□□□□ -1.06
HDAC4-216ENST00000544989 TIMM8BQ9Y5J9 83 aaPredicted RBP8.42□□□□□ -1.06
HDAC4-216ENST00000544989 M0R3E3 92 aa8.41□□□□□ -1.06
HDAC4-216ENST00000544989 MBP02144 154 aa8.41□□□□□ -1.06
HDAC4-216ENST00000544989 CT45A10P0DMU9 189 aa8.41□□□□□ -1.06
HDAC4-216ENST00000544989 UBE2L3P68036 154 aaKnown RBP8.41□□□□□ -1.06
HDAC4-216ENST00000544989 ICAM4Q14773 271 aa8.41□□□□□ -1.06
HDAC4-216ENST00000544989 FAM74A1Q5RGS3 127 aa8.41□□□□□ -1.06
HDAC4-216ENST00000544989 GFI1BQ5VTD9 330 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms