RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 STAG3L2P0CL84 134 aa9.15□□□□□ -0.94
ACTN1-206ENST00000544964 STAG3L3P0CL85 134 aa9.15□□□□□ -0.94
ACTN1-206ENST00000544964 ARL14EPLP0DKL9 152 aa9.15□□□□□ -0.94
ACTN1-206ENST00000544964 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
ACTN1-206ENST00000544964 DEFB135Q30KP9 77 aa9.15□□□□□ -0.94
ACTN1-206ENST00000544964 FAM213BQ8TBF2 198 aa9.15□□□□□ -0.94
ACTN1-206ENST00000544964 SAT2Q96F10 170 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-206ENST00000544964 ZNF331Q9NQX6 463 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-206ENST00000544964 TP53TG1Q9Y2A0 90 aa9.15□□□□□ -0.94
ACTN1-206ENST00000544964 A0A0J9YWU9 116 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 NDUFB4O95168 129 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 PMS2P11Q13670 270 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 GUK1Q16774 197 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 SAMD13Q5VXD3 122 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 PQLC2Q6ZP29 291 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 Q6ZWC4 215 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 PHYHIPLQ96FC7 376 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 SLC50A1Q9BRV3 221 aa9.14□□□□□ -0.95
ACTN1-206ENST00000544964 F6UB75 175 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 CXorf1O96002 111 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
ACTN1-206ENST00000544964 GCHFRP30047 84 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 FGF8P55075 233 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-206ENST00000544964 PSG3Q16557 428 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 FAM74A1Q5RGS3 127 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 EIF5AL1Q6IS14 154 aaKnown RBP9.13□□□□□ -0.95
ACTN1-206ENST00000544964 ALKAL2Q6UX46 152 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 IQCF2Q8IXL9 164 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 DNAH10Q8IVF4 4471 aa9.13□□□□□ -0.95
ACTN1-206ENST00000544964 A0A1B0GV50 99 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 MAP1LC3B2A6NCE7 125 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 NUPR2A6NF83 97 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 ZNF705FA8MVS1 300 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-206ENST00000544964 SPRY2O43597 315 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 ZNF253O75346 499 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 APOC4P55056 127 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 RANP62826 216 aaKnown RBP9.12□□□□□ -0.95
ACTN1-206ENST00000544964 PSG9Q00887 426 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 PDE6HQ13956 83 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 DPPA3Q6W0C5 159 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 ZNF738Q8NE65 137 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 MAP1LC3BQ9GZQ8 125 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 TMPRSS5Q9H3S3 457 aa9.12□□□□□ -0.95
ACTN1-206ENST00000544964 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 M0R3E3 92 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 ZNF705DP0CH99 300 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-206ENST00000544964 ZNF705BP0CI00 300 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-206ENST00000544964 SULT1A2P50226 295 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 ICAM4Q14773 271 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 STHQ8IWL8 128 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 SFT2D1Q8WV19 159 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 RPUSD4Q96CM3 377 aaKnown RBP9.11□□□□□ -0.95
ACTN1-206ENST00000544964 RNF183Q96D59 192 aa9.11□□□□□ -0.95
ACTN1-206ENST00000544964 SAV1Q9H4B6 383 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-206ENST00000544964 A0A0J9YX75 114 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 UBE2CO00762 179 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 LY6G6CO95867 125 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 IGKV3-20P01619 116 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 H2AFB1P0C5Y9 115 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 RAB5CP51148 216 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 EBLN2Q6P2I7 272 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-206ENST00000544964 FOXI2Q6ZQN5 318 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 Q9H3A6 140 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 AAMDCQ9H7C9 122 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 VPS13DQ5THJ4 4388 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 HERC2O95714 4834 aa9.1□□□□□ -0.95
ACTN1-206ENST00000544964 H3BMM0 161 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 HLA-DRB4P13762 266 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 UBE2G2P60604 165 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
ACTN1-206ENST00000544964 OR4B1Q8NGF8 309 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 SUN5Q8TC36 379 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 TMEM167BQ9NRX6 74 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 CLEC5AQ9NY25 188 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 HLA-DRB4X5D2U9 266 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 AGRNO00468 2067 aa9.09□□□□□ -0.95
ACTN1-206ENST00000544964 PGPA6NDG6 321 aa9.08□□□□□ -0.96
ACTN1-206ENST00000544964 ZNF705EA8MWA4 302 aaPredicted RBP9.08□□□□□ -0.96
ACTN1-206ENST00000544964 HIST1H1AQ02539 215 aaPredicted RBP9.08□□□□□ -0.96
ACTN1-206ENST00000544964 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
ACTN1-206ENST00000544964 OR8A1Q8NGG7 326 aa9.08□□□□□ -0.96
ACTN1-206ENST00000544964 OTORQ9NRC9 128 aa9.08□□□□□ -0.96
ACTN1-206ENST00000544964 PRELID1Q9Y255 219 aa9.08□□□□□ -0.96
ACTN1-206ENST00000544964 HECTD4Q9Y4D8 3996 aa9.07□□□□□ -0.96
ACTN1-206ENST00000544964 CNN1P51911 297 aaKnown RBP9.07□□□□□ -0.96
ACTN1-206ENST00000544964 FXYD7P58549 80 aa9.07□□□□□ -0.96
ACTN1-206ENST00000544964 CCL20P78556 96 aa9.07□□□□□ -0.96
ACTN1-206ENST00000544964 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
ACTN1-206ENST00000544964 RPH3ALQ9UNE2 315 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms