RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 ZNF586Q9NXT0 402 aa9.93□□□□□ -0.82
VAMP1-208ENST00000544432 DNAH6Q9C0G6 4158 aa9.93□□□□□ -0.82
VAMP1-208ENST00000544432 TRBV19A0A075B6N1 114 aa9.92□□□□□ -0.82
VAMP1-208ENST00000544432 SNRPCP09234 159 aaKnown RBP9.92□□□□□ -0.82
VAMP1-208ENST00000544432 CDKN1BP46527 198 aa9.92□□□□□ -0.82
VAMP1-208ENST00000544432 CLINT1Q14677 625 aa9.92□□□□□ -0.82
VAMP1-208ENST00000544432 BAP18Q8IXM2 172 aa9.92□□□□□ -0.82
VAMP1-208ENST00000544432 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
VAMP1-208ENST00000544432 THAP6Q8TBB0 222 aa9.92□□□□□ -0.82
VAMP1-208ENST00000544432 C20orf144Q9BQM9 153 aa9.92□□□□□ -0.82
VAMP1-208ENST00000544432 YTHDF2Q9Y5A9 579 aaKnown RBP9.92□□□□□ -0.82
VAMP1-208ENST00000544432 TRAV12-2A0A075B6T6 113 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 ZNF705GA8MUZ8 300 aaPredicted RBP9.91□□□□□ -0.82
VAMP1-208ENST00000544432 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 H3BTX0 84 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 TAS2R60P59551 318 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 ATP5SQ99766 215 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 PRELID1Q9Y255 219 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 HSPB11Q9Y547 144 aa9.91□□□□□ -0.82
VAMP1-208ENST00000544432 EPPK1P58107 5090 aaKnown RBP9.9□□□□□ -0.82
VAMP1-208ENST00000544432 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 C17orf112F2Z3M2 114 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 PTTG1O95997 202 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 GCSAMLQ5JQS6 135 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 RPP25LQ8N5L8 163 aaKnown RBP9.9□□□□□ -0.82
VAMP1-208ENST00000544432 FAM167A-AS1Q96KT0 104 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 LINC01587Q99440 93 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 NDUFAF3Q9BU61 184 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 SLC25A2Q9BXI2 301 aa9.9□□□□□ -0.82
VAMP1-208ENST00000544432 MRPL32Q9BYC8 188 aaKnown RBP9.9□□□□□ -0.82
VAMP1-208ENST00000544432 NPIPB6E9PJ23 425 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 H7BYZ3 331 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 NDUFB4O95168 129 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 RPL12P30050 165 aaKnown RBP9.89□□□□□ -0.83
VAMP1-208ENST00000544432 DAD1P61803 113 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 PARD6GQ9BYG4 376 aaPredicted RBP9.89□□□□□ -0.83
VAMP1-208ENST00000544432 MBD2Q9UBB5 411 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 TIMM9Q9Y5J7 89 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 DNAH10Q8IVF4 4471 aa9.89□□□□□ -0.83
VAMP1-208ENST00000544432 PLAC8L1A1L4L8 177 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 PRM2P04554 102 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 CT45A10P0DMU9 189 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 PYYP10082 97 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 AZU1P20160 251 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 LEPP41159 167 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 PLA2G2EQ9NZK7 142 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 FUT9Q9Y231 359 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 ALG5Q9Y673 324 aa9.88□□□□□ -0.83
VAMP1-208ENST00000544432 IFNA5P01569 189 aa9.87□□□□□ -0.83
VAMP1-208ENST00000544432 NBEAP1P0C6P0 100 aa9.87□□□□□ -0.83
VAMP1-208ENST00000544432 PRB4P10163 310 aaPredicted RBP9.87□□□□□ -0.83
VAMP1-208ENST00000544432 MIR17HGQ75NE6 70 aa9.87□□□□□ -0.83
VAMP1-208ENST00000544432 SCGB1C1Q8TD33 95 aa9.87□□□□□ -0.83
VAMP1-208ENST00000544432 C16orf74Q96GX8 76 aa9.87□□□□□ -0.83
VAMP1-208ENST00000544432 LINC00477Q96M19 166 aa9.87□□□□□ -0.83
VAMP1-208ENST00000544432 OR51M1Q9H341 326 aa9.87□□□□□ -0.83
VAMP1-208ENST00000544432 M0R3E3 92 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 P0DMU3 169 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 KIR3DS1Q14943 382 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 GFI1BQ5VTD9 330 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 BLNKQ8WV28 456 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 FXYD5Q96DB9 178 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 PAXXQ9BUH6 204 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 AAMDCQ9H7C9 122 aa9.86□□□□□ -0.83
VAMP1-208ENST00000544432 TIMM8BQ9Y5J9 83 aaPredicted RBP9.86□□□□□ -0.83
VAMP1-208ENST00000544432 FFAR4Q5NUL3 377 aa9.85□□□□□ -0.83
VAMP1-208ENST00000544432 POM121L12Q8N7R1 296 aa9.85□□□□□ -0.83
VAMP1-208ENST00000544432 RNASE8Q8TDE3 154 aaKnown RBP9.85□□□□□ -0.83
VAMP1-208ENST00000544432 TMEM263Q8WUH6 116 aaKnown RBP9.85□□□□□ -0.83
VAMP1-208ENST00000544432 RNF141Q8WVD5 230 aa9.85□□□□□ -0.83
VAMP1-208ENST00000544432 FAM19A4Q96LR4 140 aa9.85□□□□□ -0.83
VAMP1-208ENST00000544432 WFDC1Q9HC57 220 aa9.85□□□□□ -0.83
VAMP1-208ENST00000544432 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
VAMP1-208ENST00000544432 SLC25A5P05141 298 aaKnown RBP9.84□□□□□ -0.83
VAMP1-208ENST00000544432 NMBP08949 121 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 ICAM4Q14773 271 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 CCDC28AQ8IWP9 274 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 LYPD1Q8N2G4 141 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 EXOC3-AS1Q8N2X6 119 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 ASB13Q8WXK3 278 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 SMIM3Q9BZL3 60 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 AGPAT4-IT1Q9H0P7 198 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 MED28Q9H204 178 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 BIRC6Q9NR09 4857 aa9.84□□□□□ -0.83
VAMP1-208ENST00000544432 CBY3A6NI87 242 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 KLLNB2CW77 178 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 DEFB130BP0DP73 79 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 DEFB130AP0DP74 79 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 HTN1P15515 57 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 HTN3P15516 51 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 CRISP2P16562 243 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 TAS2R45P59539 299 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 ERCC8Q13216 396 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 FCN2Q15485 313 aa9.83□□□□□ -0.84
VAMP1-208ENST00000544432 PYGO2Q9BRQ0 406 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms