RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 MBP02144 154 aa13.86□□□□□ -0.19
DDX55-211ENST00000544429 OR10J4P0C629 311 aa13.86□□□□□ -0.19
DDX55-211ENST00000544429 Q8NAQ8 132 aa13.86□□□□□ -0.19
DDX55-211ENST00000544429 BLNKQ8WV28 456 aa13.86□□□□□ -0.19
DDX55-211ENST00000544429 C11orf68Q9H3H3 251 aaKnown RBP13.86□□□□□ -0.19
DDX55-211ENST00000544429 PRELID1Q9Y255 219 aa13.86□□□□□ -0.19
DDX55-211ENST00000544429 A0A0D9SG52 128 aa13.85□□□□□ -0.19
DDX55-211ENST00000544429 M0R3E3 92 aa13.85□□□□□ -0.19
DDX55-211ENST00000544429 CRXO43186 299 aaPredicted RBP13.85□□□□□ -0.19
DDX55-211ENST00000544429 EIF3GO75821 320 aaKnown RBP eCLIP13.85□□□□□ -0.19
DDX55-211ENST00000544429 FXYD7P58549 80 aa13.85□□□□□ -0.19
DDX55-211ENST00000544429 HIST1H1AQ02539 215 aaPredicted RBP13.85□□□□□ -0.19
DDX55-211ENST00000544429 FAM122CQ6P4D5 195 aa13.85□□□□□ -0.19
DDX55-211ENST00000544429 PQLC2Q6ZP29 291 aa13.85□□□□□ -0.19
DDX55-211ENST00000544429 PHYHIPLQ96FC7 376 aa13.85□□□□□ -0.19
DDX55-211ENST00000544429 ARPC5LQ9BPX5 153 aa13.85□□□□□ -0.19
DDX55-211ENST00000544429 A0A1W2PPV4 95 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 C3orf84H3BNL1 204 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 STAG3L2P0CL84 134 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 STAG3L3P0CL85 134 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 PRB4P10163 310 aaPredicted RBP13.84□□□□□ -0.19
DDX55-211ENST00000544429 CDC34P49427 236 aaPredicted RBP13.84□□□□□ -0.19
DDX55-211ENST00000544429 LYPD1Q8N2G4 141 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 EXOC3-AS1Q8N2X6 119 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 SUN5Q8TC36 379 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 RAB24Q969Q5 203 aa13.84□□□□□ -0.19
DDX55-211ENST00000544429 NPIPB6E9PJ23 425 aa13.83□□□□□ -0.2
DDX55-211ENST00000544429 AMBPP02760 352 aa13.83□□□□□ -0.2
DDX55-211ENST00000544429 MIFP14174 115 aa13.83□□□□□ -0.2
DDX55-211ENST00000544429 UBE2L3P68036 154 aaKnown RBP13.83□□□□□ -0.2
DDX55-211ENST00000544429 ICAM4Q14773 271 aa13.83□□□□□ -0.2
DDX55-211ENST00000544429 C1orf158Q8N1D5 194 aa13.83□□□□□ -0.2
DDX55-211ENST00000544429 IGF2BP2-AS1Q96M15 143 aa13.83□□□□□ -0.2
DDX55-211ENST00000544429 NEU1Q99519 415 aa13.83□□□□□ -0.2
DDX55-211ENST00000544429 BOLA2-SMG1P6H3BVE0 249 aa13.82□□□□□ -0.2
DDX55-211ENST00000544429 BCL2L11O43521 198 aa13.82□□□□□ -0.2
DDX55-211ENST00000544429 SPINK13Q1W4C9 94 aa13.82□□□□□ -0.2
DDX55-211ENST00000544429 ODF3Q96PU9 254 aa13.82□□□□□ -0.2
DDX55-211ENST00000544429 AAMDCQ9H7C9 122 aa13.82□□□□□ -0.2
DDX55-211ENST00000544429 M0R2Z0 102 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 C1QBP02746 253 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 RBMY1A1P0DJD3 496 aaKnown RBP13.81□□□□□ -0.2
DDX55-211ENST00000544429 RBMY1CP0DJD4 496 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 ARL14EPLP0DKL9 152 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 RBMY1FQ15415 496 aaKnown RBP13.81□□□□□ -0.2
DDX55-211ENST00000544429 ZNF726P1Q15940 193 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 SSX7Q7RTT5 188 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 OR10J6PQ8NGY7 276 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 IL17DQ8TAD2 202 aa13.81□□□□□ -0.2
DDX55-211ENST00000544429 IGHV4-28A0A0C4DH34 117 aa13.8□□□□□ -0.2
DDX55-211ENST00000544429 HMGB3O15347 200 aaKnown RBP13.8□□□□□ -0.2
DDX55-211ENST00000544429 RANP62826 216 aaKnown RBP13.8□□□□□ -0.2
DDX55-211ENST00000544429 FAM19A4Q96LR4 140 aa13.8□□□□□ -0.2
DDX55-211ENST00000544429 ACTR3CQ9C0K3 210 aaPredicted RBP13.8□□□□□ -0.2
DDX55-211ENST00000544429 Q9H3A6 140 aa13.8□□□□□ -0.2
DDX55-211ENST00000544429 hCG_2014768A0A024R1R8 64 aa13.79□□□□□ -0.2
DDX55-211ENST00000544429 A0A1B0GVG6 124 aa13.79□□□□□ -0.2
DDX55-211ENST00000544429 CT45A10P0DMU9 189 aa13.79□□□□□ -0.2
DDX55-211ENST00000544429 LGALSLQ3ZCW2 172 aaPredicted RBP13.79□□□□□ -0.2
DDX55-211ENST00000544429 CASC10Q5T4H9 136 aa13.79□□□□□ -0.2
DDX55-211ENST00000544429 C9orf47Q6ZRZ4 202 aa13.79□□□□□ -0.2
DDX55-211ENST00000544429 TMUB2Q71RG4 321 aa13.79□□□□□ -0.2
DDX55-211ENST00000544429 PLA2G2EQ9NZK7 142 aa13.79□□□□□ -0.2
DDX55-211ENST00000544429 STARD9Q9P2P6 4700 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 SMIM9A6NGZ8 99 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 SEC11BP0C7V7 166 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 GCHFRP30047 84 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 CDKN1BP46527 198 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 AKAP14Q86UN6 197 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 BAP18Q8IXM2 172 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 AGPAT4-IT1Q9H0P7 198 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 OTORQ9NRC9 128 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
DDX55-211ENST00000544429 CTXND1A0A1B0GTU2 59 aa13.77□□□□□ -0.21
DDX55-211ENST00000544429 KANTRA0A1W2PQU2 76 aa13.77□□□□□ -0.21
DDX55-211ENST00000544429 CD300CQ08708 224 aa13.77□□□□□ -0.21
DDX55-211ENST00000544429 ARL6IP6Q8N6S5 226 aa13.77□□□□□ -0.21
DDX55-211ENST00000544429 STOML3Q8TAV4 291 aa13.77□□□□□ -0.21
DDX55-211ENST00000544429 LINC00477Q96M19 166 aa13.77□□□□□ -0.21
DDX55-211ENST00000544429 TRAV12-2A0A075B6T6 113 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 IGKV2-40A0A087WW87 121 aaPredicted RBP13.76□□□□□ -0.21
DDX55-211ENST00000544429 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 DEFB4AO15263 64 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 CXorf1O96002 111 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 INSP01308 110 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 IGKV2D-40P01614 121 aaPredicted RBP13.76□□□□□ -0.21
DDX55-211ENST00000544429 KIR3DS1Q14943 382 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 AKR1C8PQ5T2L2 129 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 HYLS1Q96M11 299 aa13.76□□□□□ -0.21
DDX55-211ENST00000544429 ZNF471Q9BX82 626 aaPredicted RBP13.76□□□□□ -0.21
DDX55-211ENST00000544429 SLC25A5P05141 298 aaKnown RBP13.75□□□□□ -0.21
DDX55-211ENST00000544429 TSPOP30536 169 aa13.75□□□□□ -0.21
DDX55-211ENST00000544429 ERCC8Q13216 396 aa13.75□□□□□ -0.21
DDX55-211ENST00000544429 VGLL1Q99990 258 aa13.75□□□□□ -0.21
DDX55-211ENST00000544429 C20orf144Q9BQM9 153 aa13.75□□□□□ -0.21
DDX55-211ENST00000544429 TMEM167BQ9NRX6 74 aa13.75□□□□□ -0.21
DDX55-211ENST00000544429 KLLNB2CW77 178 aa13.74□□□□□ -0.21
DDX55-211ENST00000544429 DIRC3C9JPN6 131 aa13.74□□□□□ -0.21
DDX55-211ENST00000544429 NMBP08949 121 aa13.74□□□□□ -0.21
DDX55-211ENST00000544429 CRISP2P16562 243 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms