RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 LYL1P12980 280 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 ATP6V0BQ99437 205 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 PAX9P55771 341 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 APC2O95996 2303 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 CACNA1DQ01668 2161 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 TRBV20-1A0A075B6N2 111 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 GAGE7O76087 117 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 CLPSP04118 112 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 GAGE12FP0CL80 117 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 GAGE12GP0CL81 117 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 GAGE12IP0CL82 117 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 ZNRF2Q8NHG8 242 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 TMEM190Q8WZ59 177 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 H3BMG7 143 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 ATP6V0E1O15342 81 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 CEND1Q8N111 149 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 MAPK1IP1LQ8NDC0 245 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
CHD4-210ENST00000544040 BPESC1Q9GZL8 116 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 OOSP1A8MZH6 123 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 F8W1H4 67 aa12.43□□□□□ -0.42
CHD4-210ENST00000544040 IGHG4P01861 327 aa12.43□□□□□ -0.42
CHD4-210ENST00000544040 ANXA2RQ3ZCQ2 193 aa12.43□□□□□ -0.42
CHD4-210ENST00000544040 CGB3P0DN86 165 aa12.43□□□□□ -0.42
CHD4-210ENST00000544040 DAD1P61803 113 aa12.43□□□□□ -0.42
CHD4-210ENST00000544040 C5orf47Q569G3 176 aa12.43□□□□□ -0.42
CHD4-210ENST00000544040 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 KLF5Q13887 457 aaPredicted RBP12.42□□□□□ -0.42
CHD4-210ENST00000544040 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 PSME4Q14997 1843 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 IGLL1P15814 213 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 BVES-AS1Q5T3Y7 98 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 NDUFA12Q9UI09 145 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 TRBV6-6A0A0A6YYG2 114 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 IGLC2P0DOY2 106 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 A0A1W2PPM0 123 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 SDHAF1A6NFY7 115 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 NDUFB8O95169 186 aa12.42□□□□□ -0.42
CHD4-210ENST00000544040 UTF1Q5T230 341 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 AMTNQ6UX39 209 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 ZNF492Q9P255 531 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 GAGE12HA6NDE8 117 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 DEFB105AQ8NG35 78 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 TAL2Q16559 108 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 CRYBA4P53673 196 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
CHD4-210ENST00000544040 ALPK2Q86TB3 2170 aa12.41□□□□□ -0.42
CHD4-210ENST00000544040 CLPSL1A2RUU4 121 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 G3V318 75 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 TEX36Q5VZQ5 186 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 RBBP6Q7Z6E9 1792 aaKnown RBP12.4□□□□□ -0.42
CHD4-210ENST00000544040 PRSS29PA6NIE9 313 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 VWC2Q2TAL6 325 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 TP53BP1Q12888 1972 aaPredicted RBP12.4□□□□□ -0.42
CHD4-210ENST00000544040 COX8AP10176 69 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 RBM3P98179 157 aaKnown RBP12.4□□□□□ -0.42
CHD4-210ENST00000544040 PDE6HQ13956 83 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 SIGLEC8Q9NYZ4 499 aa12.4□□□□□ -0.42
CHD4-210ENST00000544040 NYNRINQ9P2P1 1898 aaKnown RBP12.39□□□□□ -0.43
CHD4-210ENST00000544040 CD59P13987 128 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 SS18L2Q9UHA2 77 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 PRO1854Q9UHT4 67 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 PARP14Q460N5 1801 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 NTN3O00634 580 aaPredicted RBP12.39□□□□□ -0.43
CHD4-210ENST00000544040 CRYGCP07315 174 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 CGB7P0DN87 165 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 CT83Q5H943 113 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 C15orf53Q8NAA6 179 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 TMEM243Q9BU79 118 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 ZNF726P1Q15940 193 aa12.39□□□□□ -0.43
CHD4-210ENST00000544040 C8orf86Q6ZUL3 223 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 IGKV1-6A0A0C4DH72 117 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 LINC01356Q8N9X3 169 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 TRBV19A0A075B6N1 114 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 ANKRD29Q8N6D5 301 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 IGHV1OR15-1A0A075B7D0 117 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 NPYP01303 97 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 V9GYV3 84 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 FNDC10F2Z333 226 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 GATA4P43694 442 aa12.38□□□□□ -0.43
CHD4-210ENST00000544040 LINC01619G3V211 115 aa12.37□□□□□ -0.43
CHD4-210ENST00000544040 DKK2Q9UBU2 259 aa12.37□□□□□ -0.43
CHD4-210ENST00000544040 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
CHD4-210ENST00000544040 KIF26BQ2KJY2 2108 aa12.37□□□□□ -0.43
CHD4-210ENST00000544040 IGHV4-4A0A075B6R2 117 aa12.37□□□□□ -0.43
CHD4-210ENST00000544040 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
CHD4-210ENST00000544040 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
CHD4-210ENST00000544040 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
CHD4-210ENST00000544040 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
CHD4-210ENST00000544040 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
CHD4-210ENST00000544040 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
CHD4-210ENST00000544040 GBF1Q92538 1859 aa12.36□□□□□ -0.43
CHD4-210ENST00000544040 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
CHD4-210ENST00000544040 E7EQL1 145 aa12.36□□□□□ -0.43
CHD4-210ENST00000544040 DUX4L9Q6RFH8 374 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 675.3 ms