RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 APOC4P55056 127 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 FAM74A1Q5RGS3 127 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 LYPD1Q8N2G4 141 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 OR4B1Q8NGF8 309 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 ASCL2Q99929 193 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 PRELID1Q9Y255 219 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 HLA-DRB4X5D2U9 266 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 A0A0J9YX75 114 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 A0A1B0GV50 99 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 H3BMM0 161 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 M0R3E3 92 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 ZNF705DP0CH99 300 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 ZNF705BP0CI00 300 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 LINC00322Q6ZN03 302 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 TRPT1Q86TN4 253 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 B9D2Q9BPU9 175 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 TMPRSS5Q9H3S3 457 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 SBSPONQ8IVN8 264 aa10.67□□□□□ -0.7
TNFRSF1A-216ENST00000543995 OR8A1Q8NGG7 326 aa10.67□□□□□ -0.7
TNFRSF1A-216ENST00000543995 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
TNFRSF1A-216ENST00000543995 MRPL53Q96EL3 112 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-216ENST00000543995 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
TNFRSF1A-216ENST00000543995 PGPA6NDG6 321 aa10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 ZNF705EA8MWA4 302 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 TEX46H3BTG2 121 aa10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 CSN1S1P47710 185 aa10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 CNN1P51911 297 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 HAGHQ16775 308 aa10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 OR10J6PQ8NGY7 276 aa10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 SUN5Q8TC36 379 aa10.66□□□□□ -0.7
TNFRSF1A-216ENST00000543995 KIR2DL5BA0A0G2JN68 375 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 KIR2DL5BA0A0G2JPC4 375 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 PRAC2D3DTV9 90 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 UBE2G2P60604 165 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 KIR2DL5AQ8N109 375 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 KIR2DL5BQ8NHK3 375 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 CSTL1Q9H114 145 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 PPP1R14DQ9NXH3 145 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 RPH3ALQ9UNE2 315 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 FBN3Q75N90 2809 aa10.65□□□□□ -0.7
TNFRSF1A-216ENST00000543995 CA1P00915 261 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-216ENST00000543995 SLC25A5P05141 298 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-216ENST00000543995 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-216ENST00000543995 RXFP4Q8TDU9 374 aa10.64□□□□□ -0.71
TNFRSF1A-216ENST00000543995 HBE1P02100 147 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 IGKV2-40A0A087WW87 121 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 A0A1W2PRE2 83 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 UBE2CO00762 179 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 IGKV2D-40P01614 121 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 FXYD7P58549 80 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 TEX261Q6UWH6 196 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 CLUHP3Q96NS8 147 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 SLC35B3Q9H1N7 401 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 YTHDF2Q9Y5A9 579 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 MEGF8Q7Z7M0 2845 aa10.63□□□□□ -0.71
TNFRSF1A-216ENST00000543995 TRAV1-1A0A0B4J248 108 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 GGTLC3B5MD39 225 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 DIRC3C9JPN6 131 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 PPT1P50897 306 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 BLOC1S1P78537 153 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 IFITM2Q01629 132 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 ERCC8Q13216 396 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 CST9LP1Q5W188 147 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 NKX6-2Q9C056 277 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
TNFRSF1A-216ENST00000543995 FAM74A7A6NL05 159 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 PAGE4O60829 102 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 IFNA7P01567 189 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 GNG5P63218 68 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 DEFB135Q30KP9 77 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 ZNF680Q8NEM1 530 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 C1QTNF4Q9BXJ3 329 aa10.61□□□□□ -0.71
TNFRSF1A-216ENST00000543995 A8MTW9 85 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 NPIPB6E9PJ23 425 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 CCL20P78556 96 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 SPINK13Q1W4C9 94 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 TMEM78Q5T7P6 136 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 GOLT1AQ6ZVE7 132 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 Q6ZWC4 215 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 LINC00477Q96M19 166 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 GNG13Q9P2W3 67 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 XCL2Q9UBD3 114 aa10.6□□□□□ -0.71
TNFRSF1A-216ENST00000543995 RBAKDNA6NC62 111 aa10.59□□□□□ -0.71
TNFRSF1A-216ENST00000543995 K7EQM0 130 aa10.59□□□□□ -0.71
TNFRSF1A-216ENST00000543995 M0R2Z0 102 aa10.59□□□□□ -0.71
TNFRSF1A-216ENST00000543995 CT45A10P0DMU9 189 aa10.59□□□□□ -0.71
TNFRSF1A-216ENST00000543995 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
TNFRSF1A-216ENST00000543995 C9orf47Q6ZRZ4 202 aa10.59□□□□□ -0.71
TNFRSF1A-216ENST00000543995 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
TNFRSF1A-216ENST00000543995 RCHY1Q96PM5 261 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms