RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 BOLA2-SMG1P6H3BVE0 249 aa10.03□□□□□ -0.8
SP140-213ENST00000543928 CXorf1O96002 111 aa10.03□□□□□ -0.8
SP140-213ENST00000543928 GCHFRP30047 84 aa10.03□□□□□ -0.8
SP140-213ENST00000543928 APOC4P55056 127 aa10.03□□□□□ -0.8
SP140-213ENST00000543928 RANP62826 216 aaKnown RBP10.03□□□□□ -0.8
SP140-213ENST00000543928 FAM213BQ8TBF2 198 aa10.03□□□□□ -0.8
SP140-213ENST00000543928 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
SP140-213ENST00000543928 KIR2DL5BA0A0G2JN68 375 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 KIR2DL5BA0A0G2JPC4 375 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 MAP1LC3B2A6NCE7 125 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 M0R3E3 92 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 IGKV3-20P01619 116 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
SP140-213ENST00000543928 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
SP140-213ENST00000543928 FGF8P55075 233 aaPredicted RBP10.02□□□□□ -0.81
SP140-213ENST00000543928 ICAM4Q14773 271 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 DPPA3Q6W0C5 159 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 IQCF2Q8IXL9 164 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 KIR2DL5AQ8N109 375 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 OR4B1Q8NGF8 309 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 KIR2DL5BQ8NHK3 375 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 MAP1LC3BQ9GZQ8 125 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 Q9H3A6 140 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 TMEM167BQ9NRX6 74 aa10.02□□□□□ -0.81
SP140-213ENST00000543928 PRAC2D3DTV9 90 aa10.01□□□□□ -0.81
SP140-213ENST00000543928 CNN1P51911 297 aaKnown RBP10.01□□□□□ -0.81
SP140-213ENST00000543928 HIST1H1AQ02539 215 aaPredicted RBP10.01□□□□□ -0.81
SP140-213ENST00000543928 LYPD1Q8N2G4 141 aa10.01□□□□□ -0.81
SP140-213ENST00000543928 OR8A1Q8NGG7 326 aa10.01□□□□□ -0.81
SP140-213ENST00000543928 SUN5Q8TC36 379 aa10.01□□□□□ -0.81
SP140-213ENST00000543928 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
SP140-213ENST00000543928 CSTL1Q9H114 145 aa10.01□□□□□ -0.81
SP140-213ENST00000543928 PRELID1Q9Y255 219 aa10.01□□□□□ -0.81
SP140-213ENST00000543928 DUSP14O95147 198 aaKnown RBP10□□□□□ -0.81
SP140-213ENST00000543928 SULT1A2P50226 295 aa10□□□□□ -0.81
SP140-213ENST00000543928 RAB5CP51148 216 aa10□□□□□ -0.81
SP140-213ENST00000543928 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
SP140-213ENST00000543928 SFT2D1Q8WV19 159 aa10□□□□□ -0.81
SP140-213ENST00000543928 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
SP140-213ENST00000543928 TMPRSS5Q9H3S3 457 aa10□□□□□ -0.81
SP140-213ENST00000543928 OTORQ9NRC9 128 aa10□□□□□ -0.81
SP140-213ENST00000543928 UBE2CO00762 179 aa9.99□□□□□ -0.81
SP140-213ENST00000543928 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
SP140-213ENST00000543928 H2AFB1P0C5Y9 115 aa9.99□□□□□ -0.81
SP140-213ENST00000543928 FAM74A1Q5RGS3 127 aa9.99□□□□□ -0.81
SP140-213ENST00000543928 CLUHP3Q96NS8 147 aa9.99□□□□□ -0.81
SP140-213ENST00000543928 TM2D3Q9BRN9 247 aa9.99□□□□□ -0.81
SP140-213ENST00000543928 HUWE1Q7Z6Z7 4374 aaKnown RBP9.99□□□□□ -0.81
SP140-213ENST00000543928 A0A1B0GV50 99 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 PGPA6NDG6 321 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 A8MTW9 85 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 GIG44P09565 113 aaPredicted RBP9.98□□□□□ -0.81
SP140-213ENST00000543928 NHLRC4P0CG21 123 aaPredicted RBP9.98□□□□□ -0.81
SP140-213ENST00000543928 CSN1S1P47710 185 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 FXYD7P58549 80 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
SP140-213ENST00000543928 ALKAL2Q6UX46 152 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 OR10J6PQ8NGY7 276 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 SPATA25Q9BR10 227 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 SLC35B3Q9H1N7 401 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 RETNQ9HD89 108 aa9.98□□□□□ -0.81
SP140-213ENST00000543928 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 UBE2G2P60604 165 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 DEFB135Q30KP9 77 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 Q6ZWC4 215 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 CMTM2Q8TAZ6 248 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 RXFP4Q8TDU9 374 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 ZMAT4Q9H898 229 aa9.97□□□□□ -0.81
SP140-213ENST00000543928 IGKV2-40A0A087WW87 121 aaPredicted RBP9.96□□□□□ -0.82
SP140-213ENST00000543928 A0A1W2PRE2 83 aa9.96□□□□□ -0.82
SP140-213ENST00000543928 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
SP140-213ENST00000543928 IGKV2D-40P01614 121 aaPredicted RBP9.96□□□□□ -0.82
SP140-213ENST00000543928 SLC25A5P05141 298 aaKnown RBP9.96□□□□□ -0.82
SP140-213ENST00000543928 ERCC8Q13216 396 aa9.96□□□□□ -0.82
SP140-213ENST00000543928 PPP1R14DQ9NXH3 145 aa9.96□□□□□ -0.82
SP140-213ENST00000543928 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
SP140-213ENST00000543928 RPH3ALQ9UNE2 315 aa9.96□□□□□ -0.82
SP140-213ENST00000543928 YTHDF2Q9Y5A9 579 aaKnown RBP9.96□□□□□ -0.82
SP140-213ENST00000543928 ZNF705EA8MWA4 302 aaPredicted RBP9.95□□□□□ -0.82
SP140-213ENST00000543928 GGTLC3B5MD39 225 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 DIRC3C9JPN6 131 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 SPRY2O43597 315 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 SUMO1P63165 101 aaKnown RBP9.95□□□□□ -0.82
SP140-213ENST00000543928 SPINK13Q1W4C9 94 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 RNF183Q96D59 192 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 RCHY1Q96PM5 261 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 OVOL2Q9BRP0 275 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 C1QTNF4Q9BXJ3 329 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 TGP01266 2768 aa9.95□□□□□ -0.82
SP140-213ENST00000543928 TRAV1-1A0A0B4J248 108 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 FAM74A7A6NL05 159 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 TEX46H3BTG2 121 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 M0R2Z0 102 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 CT45A10P0DMU9 189 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 GNG5P63218 68 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 C9orf47Q6ZRZ4 202 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 ARL6IP6Q8N6S5 226 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
SP140-213ENST00000543928 VGLL1Q99990 258 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms