RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 AZU1P20160 251 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 CBLN1P23435 193 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 LCN12Q6JVE5 192 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 C5orf24Q7Z6I8 188 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 ORMDL3Q8N138 153 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 IL36BQ9NZH7 164 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 LINC01619G3V211 115 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 TMEM50AO95807 157 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 TEX36Q5VZQ5 186 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 SCGB3A1Q96QR1 104 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 MRPS16Q9Y3D3 137 aaKnown RBP5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 TRGV1A0A0A0MS02 117 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 HIGD1CA8MV81 97 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 SHISA9B4DS77 424 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 INSP01308 110 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 FOLR2P14207 255 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 C18orf15Q96N68 181 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 RCHY1Q96PM5 261 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 RNF126Q9BV68 326 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 ESM1Q9NQ30 184 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 ZNF581Q9P0T4 197 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 ZNRD1Q9P1U0 126 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 LINC00205P59089 165 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 PMCHL1Q16048 86 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 LY6G6FQ5SQ64 297 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 UBE2E2Q96LR5 201 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 MS4A6AQ9H2W1 248 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 TRAV5A0A0B4J249 113 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 PPIFP30405 207 aaKnown RBP5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 NTF4P34130 210 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 BTCP35070 178 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 NMSQ5H8A3 153 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 ASPHD1Q5U4P2 390 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 TMEM190Q8WZ59 177 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 HS3ST6Q96QI5 342 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 HOXA3O43365 443 aaPredicted RBP5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 CACNG7P62955 275 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 QRFPP83859 136 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 GATD1Q8NB37 220 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 CST9LQ9H4G1 147 aa5.57□□□□□ -1.52
SRGAP1-206ENST00000543397 IGKV2-40A0A087WW87 121 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 G3V318 75 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 IGKV2D-40P01614 121 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 IFI27P40305 119 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 DEFB131AP59861 70 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 GAGE2BQ13066 116 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 GAGE2EQ4V326 116 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 GAGE2DQ9UEU5 116 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 PLXND1Q9Y4D7 1925 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 H0YIZ8 118 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 H3BVH4 76 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 SRP19P09132 144 aaKnown RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 ZNF138P52744 262 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 C9orf153Q5TBE3 101 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 KAAG1Q9UBP8 84 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 PLXNA2O75051 1894 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 A0A1W2PPI3 338 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 RHODO00212 210 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 IGHV2-5P01817 119 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 RNASE1P07998 156 aaKnown RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 ADORA2A-AS1P86434 159 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 SLC25A34Q6PIV7 304 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 VOPP1Q96AW1 172 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 ZNF414Q96IQ9 312 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 HIST1H4GQ99525 98 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 TRAV12-3A0A0B4J271 114 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 A0A1W2PNU3 283 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 CRLF1O75462 422 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 APOMO95445 188 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 APOHP02749 345 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 SUPT4H1P63272 117 aaKnown RBP5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 EXOC3-AS1Q8N2X6 119 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 LINC00477Q96M19 166 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 RFNGQ9Y644 331 aa5.56□□□□□ -1.52
SRGAP1-206ENST00000543397 TOMM40O96008 361 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 FXYD7P58549 80 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 WDR86Q86TI4 376 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 ZNF524Q96C55 264 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 NRN1Q9NPD7 142 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 F2Z2F3 143 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 FGF16O43320 207 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 RNASE2P10153 161 aaKnown RBP5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 RNASE7Q9H1E1 156 aaKnown RBP5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 SIGLEC8Q9NYZ4 499 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 SPINK8P0C7L1 97 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 TMEM14EPQ6UXP3 125 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 WNK1Q9H4A3 2382 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 IGHV4-61A0A0C4DH41 118 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 PSCAO43653 123 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 PPBPP02775 128 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 UTF1Q5T230 341 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 LINC00311Q8N616 119 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 VPREB3Q9UKI3 123 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 HIVEP3Q5T1R4 2406 aa5.55□□□□□ -1.52
SRGAP1-206ENST00000543397 IGHV4-30-2A0A087WSY4 118 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 IZUMO1RA6ND01 250 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms