RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 MRPS12O15235 138 aaKnown RBP18.63■□□□□ 0.57
SHD-201ENST00000543264 FXYD2P54710 66 aa18.63■□□□□ 0.57
SHD-201ENST00000543264 IGKV2D-26A0A0A0MRZ7 120 aa18.62■□□□□ 0.57
SHD-201ENST00000543264 ASCL5Q7RTU5 278 aa18.62■□□□□ 0.57
SHD-201ENST00000543264 IGKV2-40A0A087WW87 121 aaPredicted RBP18.61■□□□□ 0.57
SHD-201ENST00000543264 IGKV2D-40P01614 121 aaPredicted RBP18.61■□□□□ 0.57
SHD-201ENST00000543264 WI2-2373I1.2A0A1W2PRP0 233 aa18.61■□□□□ 0.57
SHD-201ENST00000543264 PCNX1Q96RV3 2341 aa18.61■□□□□ 0.57
SHD-201ENST00000543264 TACC2O95359 2948 aa18.6■□□□□ 0.57
SHD-201ENST00000543264 EGR2P11161 476 aaPredicted RBP18.6■□□□□ 0.57
SHD-201ENST00000543264 BSPH1Q075Z2 132 aa18.6■□□□□ 0.57
SHD-201ENST00000543264 K7ERJ3 54 aa18.6■□□□□ 0.57
SHD-201ENST00000543264 LAMA5O15230 3695 aa18.6■□□□□ 0.57
SHD-201ENST00000543264 TEX48A0A1B0GUV7 120 aa18.59■□□□□ 0.57
SHD-201ENST00000543264 KLF17Q5JT82 389 aaPredicted RBP18.59■□□□□ 0.57
SHD-201ENST00000543264 ZGRF1Q86YA3 2104 aa18.59■□□□□ 0.57
SHD-201ENST00000543264 NPIPB5A8MRT5 1133 aa18.59■□□□□ 0.57
SHD-201ENST00000543264 BUB1B-PAK6H3BSN5 160 aa18.59■□□□□ 0.57
SHD-201ENST00000543264 IGLV1-47P01700 117 aa18.59■□□□□ 0.57
SHD-201ENST00000543264 COX7A1P24310 79 aa18.59■□□□□ 0.57
SHD-201ENST00000543264 MSRB1Q9NZV6 116 aa18.59■□□□□ 0.57
SHD-201ENST00000543264 SMIM17P0DL12 118 aa18.58■□□□□ 0.57
SHD-201ENST00000543264 FBLL1A6NHQ2 334 aaKnown RBP18.58■□□□□ 0.56
SHD-201ENST00000543264 GNG7O60262 68 aa18.58■□□□□ 0.56
SHD-201ENST00000543264 GAS8-AS1O95177 125 aa18.58■□□□□ 0.56
SHD-201ENST00000543264 GOSR1O95249 250 aa18.58■□□□□ 0.56
SHD-201ENST00000543264 PRSS1P07477 247 aa18.58■□□□□ 0.56
SHD-201ENST00000543264 LEPP41159 167 aa18.58■□□□□ 0.56
SHD-201ENST00000543264 ADGRG4Q8IZF6 3080 aa18.57■□□□□ 0.56
SHD-201ENST00000543264 Q8TAT8 98 aa18.57■□□□□ 0.56
SHD-201ENST00000543264 TMEM190Q8WZ59 177 aa18.57■□□□□ 0.56
SHD-201ENST00000543264 RPEQ96AT9 228 aa18.57■□□□□ 0.56
SHD-201ENST00000543264 HHLA3Q9XRX5 114 aa18.57■□□□□ 0.56
SHD-201ENST00000543264 PPIAL4CA0A0B4J2A2 164 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 K7EMI3 77 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 PPIAL4GP0DN37 164 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 SAMD13Q5VXD3 122 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 CHAC1Q9BUX1 264 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 MAP1LC3AQ9H492 121 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 CIDEAO60543 219 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 ZNF80P51504 273 aaPredicted RBP18.56■□□□□ 0.56
SHD-201ENST00000543264 ODF1Q14990 250 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 PRR25Q96S07 402 aa18.56■□□□□ 0.56
SHD-201ENST00000543264 CEACAM4O75871 244 aa18.55■□□□□ 0.56
SHD-201ENST00000543264 ZNF562Q6V9R5 426 aa18.55■□□□□ 0.56
SHD-201ENST00000543264 TNFRSF14Q92956 283 aa18.55■□□□□ 0.56
SHD-201ENST00000543264 KAAG1Q9UBP8 84 aa18.55■□□□□ 0.56
SHD-201ENST00000543264 CEACAM3P40198 252 aa18.55■□□□□ 0.56
SHD-201ENST00000543264 GTSCR1Q86UQ5 136 aa18.55■□□□□ 0.56
SHD-201ENST00000543264 NHP2Q9NX24 153 aaKnown RBP18.55■□□□□ 0.56
SHD-201ENST00000543264 C16orf97H3BN30 126 aa18.54■□□□□ 0.56
SHD-201ENST00000543264 TMEM11P17152 192 aa18.54■□□□□ 0.56
SHD-201ENST00000543264 EVI2AP22794 236 aa18.54■□□□□ 0.56
SHD-201ENST00000543264 PDE6HQ13956 83 aa18.54■□□□□ 0.56
SHD-201ENST00000543264 IGFL4Q6B9Z1 124 aa18.54■□□□□ 0.56
SHD-201ENST00000543264 CHTOPQ9Y3Y2 248 aaKnown RBP18.54■□□□□ 0.56
SHD-201ENST00000543264 TTC28Q96AY4 2481 aa18.54■□□□□ 0.56
SHD-201ENST00000543264 RNASE6Q93091 150 aaKnown RBP18.53■□□□□ 0.56
SHD-201ENST00000543264 RNF185Q96GF1 192 aa18.53■□□□□ 0.56
SHD-201ENST00000543264 VGLL1Q99990 258 aa18.53■□□□□ 0.56
SHD-201ENST00000543264 DYNLRB1Q9NP97 96 aa18.53■□□□□ 0.56
SHD-201ENST00000543264 HIGD1BQ9P298 99 aa18.53■□□□□ 0.56
SHD-201ENST00000543264 MGAQ8IWI9 3026 aa18.53■□□□□ 0.56
SHD-201ENST00000543264 ORM1P02763 201 aa18.53■□□□□ 0.56
SHD-201ENST00000543264 GTSF1LQ9H1H1 148 aa18.53■□□□□ 0.56
SHD-201ENST00000543264 TRBV25-1A0A075B6N4 114 aa18.52■□□□□ 0.56
SHD-201ENST00000543264 FCER1GP30273 86 aa18.52■□□□□ 0.56
SHD-201ENST00000543264 FOXC2Q99958 501 aa18.52■□□□□ 0.56
SHD-201ENST00000543264 IGKCP01834 107 aa18.52■□□□□ 0.56
SHD-201ENST00000543264 GFRALQ6UXV0 394 aa18.52■□□□□ 0.56
SHD-201ENST00000543264 PIFOQ8TCI5 191 aa18.52■□□□□ 0.56
SHD-201ENST00000543264 ZMAT4Q9H898 229 aa18.52■□□□□ 0.56
SHD-201ENST00000543264 RALYQ9UKM9 306 aaKnown RBP18.52■□□□□ 0.56
SHD-201ENST00000543264 IGLC6P0CF74 106 aa18.51■□□□□ 0.55
SHD-201ENST00000543264 CLEC2AQ6UVW9 174 aa18.51■□□□□ 0.55
SHD-201ENST00000543264 GATA1P15976 413 aaPredicted RBP18.51■□□□□ 0.55
SHD-201ENST00000543264 AZU1P20160 251 aa18.51■□□□□ 0.55
SHD-201ENST00000543264 IGFBPL1Q8WX77 278 aa18.51■□□□□ 0.55
SHD-201ENST00000543264 TNFRSF6BO95407 300 aa18.5■□□□□ 0.55
SHD-201ENST00000543264 THBDP07204 575 aa18.5■□□□□ 0.55
SHD-201ENST00000543264 BMI1P35226 326 aa18.5■□□□□ 0.55
SHD-201ENST00000543264 ZNF575Q86XF7 245 aa18.5■□□□□ 0.55
SHD-201ENST00000543264 PHLDA1Q8WV24 401 aaPredicted RBP18.5■□□□□ 0.55
SHD-201ENST00000543264 ZC2HC1BQ5TFG8 222 aa18.5■□□□□ 0.55
SHD-201ENST00000543264 HLA-DMBP28068 263 aa18.49■□□□□ 0.55
SHD-201ENST00000543264 POLEQ07864 2286 aa18.49■□□□□ 0.55
SHD-201ENST00000543264 CSMD1Q96PZ7 3565 aa18.49■□□□□ 0.55
SHD-201ENST00000543264 TIMM23O14925 209 aa18.49■□□□□ 0.55
SHD-201ENST00000543264 ZNF207O43670 478 aaKnown RBP18.49■□□□□ 0.55
SHD-201ENST00000543264 PPIFP30405 207 aaKnown RBP18.49■□□□□ 0.55
SHD-201ENST00000543264 S100A7AQ86SG5 101 aa18.49■□□□□ 0.55
SHD-201ENST00000543264 TMEM158Q8WZ71 300 aa18.49■□□□□ 0.55
SHD-201ENST00000543264 CNOT1A5YKK6 2376 aaKnown RBP18.49■□□□□ 0.55
SHD-201ENST00000543264 LYNX1G3V0Z9 82 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 LYNX1P0DP58 116 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 SMAGPQ0VAQ4 97 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 CEND1Q8N111 149 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 TMEM160Q9NX00 188 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 SPAARA0A1B0GVQ0 90 aa18.48■□□□□ 0.55
SHD-201ENST00000543264 TMEM8BA6NDV4 472 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms