RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 C1orf194Q5T5A4 169 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 SAMD13Q5VXD3 122 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 MORN5Q5VZ52 161 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 OR8G2PQ6IF36 304 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 DHRS11Q6UWP2 260 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 Q6ZRU5 148 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 THAP8Q8NA92 274 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 OR8A1Q8NGG7 326 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 PCNPQ8WW12 178 aaKnown RBP3.12□□□□□ -1.91
LIMS1-214ENST00000542845 TMED6Q8WW62 240 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 BAALCQ8WXS3 180 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 URB1-AS1Q96HZ7 61 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 FXYD6Q9H0Q3 95 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 PRO0255Q9UI72 69 aa3.12□□□□□ -1.91
LIMS1-214ENST00000542845 TRAV8-2A0A0B4J237 113 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 IGHV3-38A0A0C4DH36 116 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 A0A0U1RQV1 116 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 INS-IGF2F8WCM5 200 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 K7EQD1 137 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 SCGNO76038 276 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 PGAM2P15259 253 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 ORM2P19652 201 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 PSMA1P25786 263 aaKnown RBP3.11□□□□□ -1.91
LIMS1-214ENST00000542845 CRYBA4P53673 196 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 GAGE1Q13065 139 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 GAGE4Q13068 117 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 LAIR2Q6ISS4 152 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 C9orf47Q6ZRZ4 202 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 C10orf67Q8IYJ2 551 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 C8orf59Q8N0T1 100 aaPredicted RBP3.11□□□□□ -1.91
LIMS1-214ENST00000542845 DHRSXQ8N5I4 330 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 SLC24A4Q8NFF2 622 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 OR5H2Q8NGV7 314 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 RNASEH2CQ8TDP1 164 aaKnown RBP3.11□□□□□ -1.91
LIMS1-214ENST00000542845 TMEM37Q8WXS4 190 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 ACOT13Q9NPJ3 140 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 DIABLOQ9NR28 239 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 PLCXD1Q9NUJ7 323 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 MRPL16Q9NX20 251 aaKnown RBP3.11□□□□□ -1.91
LIMS1-214ENST00000542845 LSM2Q9Y333 95 aaKnown RBP3.11□□□□□ -1.91
LIMS1-214ENST00000542845 STRAPQ9Y3F4 350 aaKnown RBP3.11□□□□□ -1.91
LIMS1-214ENST00000542845 KLF12Q9Y4X4 402 aa3.11□□□□□ -1.91
LIMS1-214ENST00000542845 TRAV1-2A0A0B4J238 106 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 A0A0G2JRQ6 117 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 CRYM-AS1A6NIL9 109 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 C9JCJ5 164 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 GABARAPH6UMI1 98 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 ATG12O94817 140 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 GABARAPO95166 117 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 SNRPCP09234 159 aaKnown RBP3.1□□□□□ -1.91
LIMS1-214ENST00000542845 GNAO1P09471 354 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 HLA-DMAP28067 261 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 CAMLGP49069 296 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 PPT1P50897 306 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 SPCS3P61009 180 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 PNRC1Q12796 327 aaPredicted RBP3.1□□□□□ -1.91
LIMS1-214ENST00000542845 DAZ2Q13117 558 aaKnown RBP3.1□□□□□ -1.91
LIMS1-214ENST00000542845 SLAQ13239 276 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 BSXQ3C1V8 233 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 SP6Q3SY56 376 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 AARDQ4LEZ3 155 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 C2orf83Q53S99 150 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 GFI1BQ5VTD9 330 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 C22orf42Q6IC83 251 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 LPCAT3Q6P1A2 487 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 ZFP1Q6P2D0 407 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 Q75L30 129 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 OR11H4Q8NGC9 324 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 OR1B1Q8NGR6 318 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 BLNKQ8WV28 456 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 RPUSD4Q96CM3 377 aaKnown RBP3.1□□□□□ -1.91
LIMS1-214ENST00000542845 DPH3Q96FX2 82 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 MRPL32Q9BYC8 188 aaKnown RBP3.1□□□□□ -1.91
LIMS1-214ENST00000542845 RHBDL2Q9NX52 303 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 CACNG5Q9UF02 275 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 PAIP2BQ9ULR5 123 aaKnown RBP3.1□□□□□ -1.91
LIMS1-214ENST00000542845 GPR132Q9UNW8 380 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
LIMS1-214ENST00000542845 LPAP08519 4548 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 IGKV1D-37A0A075B6S9 117 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 TRAV8-6A0A0B4J262 113 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 LOC100131303A0A0U1RQF7 123 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 C5orf51A6NDU8 294 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 FABP1P07148 127 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 SFTA3P0C7M3 94 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 HRH1P35367 487 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 ASAH1Q13510 395 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 TDRG1Q3Y452 100 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 ARL6IP6Q8N6S5 226 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 PRR26Q8N8Z3 221 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 NRACQ8N912 160 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 Q8N976 141 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 HSD17B11Q8NBQ5 300 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 OR5H6Q8NGV6 325 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 RPL36ALQ969Q0 106 aaKnown RBP3.09□□□□□ -1.91
LIMS1-214ENST00000542845 ST6GAL2Q96JF0 529 aa3.09□□□□□ -1.91
LIMS1-214ENST00000542845 SLC35E1Q96K37 410 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms